Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq314 134 3e-26
seq85 131 4e-25
seq395 125 2e-23
seq1114 123 6e-23
seq1198 120 7e-22
seq174 113 1e-19
seq199 107 5e-18
seq128 104 6e-17
seq2164 100 7e-16
seq473 98.7 2e-15
seq340 98.7 2e-15
seq1 95.1 3e-14
>seq314
Length=2398313
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| ||||| |||||||||||||| |
Sbjct 2323422 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 2323481
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||||| || || || ||||||||||| || | |||
Sbjct 2323482 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 2323541
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || || || |||| || || | || ||
Sbjct 2323542 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 2323601
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 2323602 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648
>seq85
Length=4131313
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | ||| || | || | ||| ||||| |||||||||||||| |
Sbjct 1818184 CCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1818243
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||||| || || || ||||||||||| || | |||
Sbjct 1818244 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 1818303
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || || || |||| || || | || ||
Sbjct 1818304 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACC 1818363
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 1818364 TCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410
>seq395
Length=2662522
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| ||| || ||||| || || ||||| |
Sbjct 955164 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 955223
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| |||||||| ||||| | ||| || || | |||||||| | ||| ||| | ||
Sbjct 955224 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGA 955283
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||||||||||| || || || || || || |||||||| | ||| | ||| ||
Sbjct 955284 ATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACC 955343
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || |||||||| || || || || ||||| ||||||||
Sbjct 955344 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 955390
>seq1114
Length=1661397
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | || || || || |||
Sbjct 1502938 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 1502997
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||| ||||| ||||| |||||||||
Sbjct 1502998 ATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTT 1503057
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | | ||| || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 1503058 TCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 1503117
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 1503118 AAGATCTGCAT 1503128
>seq1198
Length=804178
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||| || || | || ||||| || ||||| | || || || || |||
Sbjct 573903 TCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 573844
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| || |||||||| ||||| ||||| |||||||||
Sbjct 573843 ATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTT 573784
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | | || || | || || || || ||||| ||||| ||||| || ||||| |||
Sbjct 573783 TCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACG 573724
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 573723 AAGATCTGCAT 573713
>seq174
Length=4297676
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| ||| || ||||| || | |||||
Sbjct 3533524 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 3533465
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||| |||||| | ||| || || ||||||||||| | ||| ||| | ||
Sbjct 3533464 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGA 3533405
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || ||||||| | ||| ||||| |
Sbjct 3533404 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATC 3533345
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| | || || || || || ||||||||
Sbjct 3533344 TCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298
>seq199
Length=3010087
Score = 107 bits (118), Expect = 5e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| ||||| |||||||||||||| |
Sbjct 689123 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 689064
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| | ||||| || || || |||||| ||| || | |||
Sbjct 689063 CGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGG 689004
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || || || | | || || | || ||
Sbjct 689003 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACC 688944
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| || ||||| ||||| || | ||||||||
Sbjct 688943 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAGAGATCTGCAT 688897
>seq128
Length=2980057
Score = 104 bits (114), Expect = 6e-17
Identities = 160/227 (70%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | ||| || | || | ||| ||||| |||||||||||||| |
Sbjct 204303 CCACCCCAGAGGCAAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 204362
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || |||| | ||||| || || || |||||| |||| || | |||
Sbjct 204363 AGAGTACGGCCATCTTTCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGG 204422
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || || || |||| || || | || ||
Sbjct 204423 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACC 204482
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| |||| ||| || | |||| ||||| || || ||||||||
Sbjct 204483 TCGAGGGTGACGGTC-TCGCCTTCAGGGTCTTCACAAAGATCTGCAT 204528
>seq2164
Length=79412
Score = 100 bits (110), Expect = 7e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | ||| || | || | ||| ||||| |||||||||| ||| |
Sbjct 52125 CCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGAC 52066
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || | ||| | ||||| || | || ||||||||||| || | |||
Sbjct 52065 AGAGTATGGCCATTTTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGG 52006
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| || || || ||| || || | || ||
Sbjct 52005 ATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACC 51946
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471
| ||| ||||| ||||| || ||||| ||||| || || ||||||
Sbjct 51945 TTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGC 51901
>seq473
Length=2797217
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 1/194 (1%)
Strand=Plus/Minus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| ||||| || ||||| | || || | || ||||| | || || |||| ||||
Sbjct 1245843 CTTTCTGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTGCCTGAAAAGA 1245784
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||| || | |||| ||||||||||||||| | || || ||||| || |
Sbjct 1245783 TGAGCCTCTGCTGGCCACGGCGGATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTCT 1245724
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
| || | ||| || | ||| || || || ||||| ||||| | |||||| ||||| | ||
Sbjct 1245723 CCATGGTATCACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTCAGGGTCTTCA-GA 1245665
Query 288464 ATATCTGCATTATG 288477
| | ||||||| ||
Sbjct 1245664 AGACCTGCATTTTG 1245651
>seq340
Length=3380363
Score = 98.7 bits (108), Expect = 2e-15
Identities = 118/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT-CCTTC 288374
|| ||||| | || || ||||| ||||| || | ||| || | |||||| |||||
Sbjct 3005086 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGAGGGGATTGCCTTC 3005027
Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434
|||||| ||||| || || ||||| || | || | | || ||||| || || || ||
Sbjct 3005026 TTTATCTTGGATCTTAGCCTTCACATTCTTGATGGTGTTACTGGATTCCACCTCCAGAGT 3004967
Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| |||||||||||||| || || ||||||||
Sbjct 3004966 GATAGTCTTGCCGGTCAGAGTCTTCACAAAAATCTGCAT 3004928
>seq1
Length=17703537
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||| | || ||||| | || || | || |||
Sbjct 13463806 TCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCTGGCAAAG 13463747
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| | | ||| || | | ||| || |||||||||||||| || || ||||| |||
Sbjct 13463746 ATGGGCCTCTGCTGGTCAGGGGAGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 13463687
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || |||| ||||| | |||||| ||||| |||
Sbjct 13463686 TCCATGGTGTCACTGGGCTCCACCTCCAGGGTGACAGTCTTGCTGGTCAGGGTCTTCACG 13463627
Query 288463 AATATCTGCATT 288474
|| |||||||||
Sbjct 13463626 AAGATCTGCATT 13463615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179595559944454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |