Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq314 134 3e-26 seq85 131 4e-25 seq395 125 2e-23 seq1114 123 6e-23 seq1198 120 7e-22 seq174 113 1e-19 seq199 107 5e-18 seq128 104 6e-17 seq2164 100 7e-16 seq473 98.7 2e-15 seq340 98.7 2e-15 seq1 95.1 3e-14 >seq314 Length=2398313 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | ||| ||||| |||||||||||||| | Sbjct 2323422 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 2323481 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || || ||||||||||| || | ||| Sbjct 2323482 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 2323541 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || |||| || || | || || Sbjct 2323542 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 2323601 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 2323602 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq85 Length=4131313 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | || | ||| ||||| |||||||||||||| | Sbjct 1818184 CCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1818243 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || || ||||||||||| || | ||| Sbjct 1818244 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 1818303 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || |||| || || | || || Sbjct 1818304 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACC 1818363 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 1818364 TCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq395 Length=2662522 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 955164 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 955223 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| ||||| | ||| || || | |||||||| | ||| ||| | || Sbjct 955224 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGA 955283 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||||| || || || || || || |||||||| | ||| | ||| || Sbjct 955284 ATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACC 955343 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| || || || || ||||| |||||||| Sbjct 955344 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 955390 >seq1114 Length=1661397 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | || || || || ||| Sbjct 1502938 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 1502997 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 1502998 ATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTT 1503057 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | ||| || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 1503058 TCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 1503117 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1503118 AAGATCTGCAT 1503128 >seq1198 Length=804178 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| || || | || ||||| || ||||| | || || || || ||| Sbjct 573903 TCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 573844 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 573843 ATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTT 573784 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | || || | || || || || ||||| ||||| ||||| || ||||| ||| Sbjct 573783 TCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACG 573724 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 573723 AAGATCTGCAT 573713 >seq174 Length=4297676 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || | ||||| Sbjct 3533524 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 3533465 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||| |||||| | ||| || || ||||||||||| | ||| ||| | || Sbjct 3533464 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGA 3533405 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || ||||||| | ||| ||||| | Sbjct 3533404 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATC 3533345 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| | || || || || || |||||||| Sbjct 3533344 TCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 >seq199 Length=3010087 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | ||| ||||| |||||||||||||| | Sbjct 689123 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 689064 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | ||||| || || || |||||| ||| || | ||| Sbjct 689063 CGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGG 689004 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || | | || || | || || Sbjct 689003 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACC 688944 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| || | |||||||| Sbjct 688943 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAGAGATCTGCAT 688897 >seq128 Length=2980057 Score = 104 bits (114), Expect = 6e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | || | ||| ||||| |||||||||||||| | Sbjct 204303 CCACCCCAGAGGCAAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 204362 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||| | ||||| || || || |||||| |||| || | ||| Sbjct 204363 AGAGTACGGCCATCTTTCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGG 204422 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || |||| || || | || || Sbjct 204423 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACC 204482 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||| ||| || | |||| ||||| || || |||||||| Sbjct 204483 TCGAGGGTGACGGTC-TCGCCTTCAGGGTCTTCACAAAGATCTGCAT 204528 >seq2164 Length=79412 Score = 100 bits (110), Expect = 7e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | || | ||| ||||| |||||||||| ||| | Sbjct 52125 CCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGAC 52066 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || | ||| | ||||| || | || ||||||||||| || | ||| Sbjct 52065 AGAGTATGGCCATTTTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGG 52006 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || ||| || || | || || Sbjct 52005 ATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACC 51946 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 | ||| ||||| ||||| || ||||| ||||| || || |||||| Sbjct 51945 TTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGC 51901 >seq473 Length=2797217 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| ||||| || ||||| | || || | || ||||| | || || |||| |||| Sbjct 1245843 CTTTCTGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTGCCTGAAAAGA 1245784 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || | ||| || | |||| ||||||||||||||| | || || ||||| || | Sbjct 1245783 TGAGCCTCTGCTGGCCACGGCGGATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTCT 1245724 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | || | ||| || | ||| || || || ||||| ||||| | |||||| ||||| | || Sbjct 1245723 CCATGGTATCACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTCAGGGTCTTCA-GA 1245665 Query 288464 ATATCTGCATTATG 288477 | | ||||||| || Sbjct 1245664 AGACCTGCATTTTG 1245651 >seq340 Length=3380363 Score = 98.7 bits (108), Expect = 2e-15 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT-CCTTC 288374 || ||||| | || || ||||| ||||| || | ||| || | |||||| ||||| Sbjct 3005086 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGAGGGGATTGCCTTC 3005027 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 |||||| ||||| || || ||||| || | || | | || ||||| || || || || Sbjct 3005026 TTTATCTTGGATCTTAGCCTTCACATTCTTGATGGTGTTACTGGATTCCACCTCCAGAGT 3004967 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| |||||||||||||| || || |||||||| Sbjct 3004966 GATAGTCTTGCCGGTCAGAGTCTTCACAAAAATCTGCAT 3004928 >seq1 Length=17703537 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||| | || ||||| | || || | || ||| Sbjct 13463806 TCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCTGGCAAAG 13463747 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | | ||| || | | ||| || |||||||||||||| || || ||||| ||| Sbjct 13463746 ATGGGCCTCTGCTGGTCAGGGGAGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTT 13463687 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || |||| ||||| | |||||| ||||| ||| Sbjct 13463686 TCCATGGTGTCACTGGGCTCCACCTCCAGGGTGACAGTCTTGCTGGTCAGGGTCTTCACG 13463627 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 13463626 AAGATCTGCATT 13463615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179595559944454