Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq314 122 9e-23 seq85 113 5e-20 seq1198 93.3 5e-14 seq184 93.3 5e-14 seq88 93.3 5e-14 seq772 91.5 2e-13 seq114 89.7 6e-13 seq47 89.7 6e-13 seq454 87.8 2e-12 seq33 86.0 7e-12 seq2164 82.4 8e-11 >seq314 Length=2398313 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| |||| ||| ||| || || ||||| || || | |||||| || | || || Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||| || || || || || || ||||||||||| | || | || ||||||||| Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| ||||| || | | ||||| || | || || |||| |||||||| || Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || ||||| |||||||| ||||| Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq85 Length=4131313 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| |||| ||| ||| || || ||||| || || | |||||| || | || || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||| || || || || || || ||||||||||| | || | || ||||||||| Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| ||||| || | | | ||| || | || || |||| |||||||| || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| |||||||| ||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq1198 Length=804178 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || ||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 573904 CTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 573845 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||| | || | || ||| || || ||| || || | ||| Sbjct 573844 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGT 573786 Query 42137 CGCCA-CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || ||||| || | ||||| || | |||||||| ||||| ||||| ||||| | Sbjct 573785 TTTCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCA 573726 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 573725 CGAAGATCTGCAT 573713 >seq184 Length=2979863 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 || ||||| || | | |||||||||| ||||||||||||||||||||| ||||||||| Sbjct 24127 TTGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 24068 Query 57063 ACTATACTACCGAGGA 57078 ||||||||| |||||| Sbjct 24067 ACTATACTAACGAGGA 24052 >seq88 Length=4457695 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1879293 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1879234 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 1879233 TATACTAACGAGGA 1879220 >seq772 Length=1036051 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 260586 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 260527 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 260526 ATACTAACGAGGA 260514 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 327171 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 327230 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 327231 TACTAACGAGGA 327242 >seq114 Length=5070965 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1474240 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1474299 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1474300 TACTAACGAGGA 1474311 >seq47 Length=4803410 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4300575 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4300634 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 4300635 TACTAACGAGGA 4300646 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4302929 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4302988 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 4302989 TACTAACGAGGA 4303000 >seq454 Length=1231369 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || || | |||||||||| |||||||||||||||||| || ||||||| |||||| Sbjct 1045277 CTCCCCGTCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGTGGGCATACTCCCCACTA 1045336 Query 57067 TACTACCGAGG 57077 ||||| ||||| Sbjct 1045337 TACTAACGAGG 1045347 >seq33 Length=6086033 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||| | ||| | ||| |||||||||||| ||||| |||| || ||| || | || Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || || ||||| ||||| ||||| |||| |||||| || | || | | ||||| || Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902 Query 42116 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 42174 | ||| | |||| || | | ||| || | | ||| || |||| ||||||| Sbjct 2214903 C-TGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGG 2214961 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| || || || || || || ||||| Sbjct 2214962 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq2164 Length=79412 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| |||| ||| || || || ||||| | || | |||||| | | | || Sbjct 52108 CACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTC 52049 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||||| || || | || || || ||||||||||| | || | | ||||||||| Sbjct 52048 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 51989 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| ||||| || | ||||| || | || || | || |||||||| || Sbjct 51988 GATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTT 51929 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGC 42206 |||||| || ||||| |||||||| ||| Sbjct 51928 GCCCGTCAGGGTCTTCACAAAGATCTGC 51901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543186365907120