Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq47 89.7 5e-13
seq174 84.2 2e-11
seq33 84.2 2e-11
>seq47
Length=4803410
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || ||| |||||| || || || |||| |
Sbjct 4289898 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCA 4289957
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || |||||||| ||| || || |
Sbjct 4289958 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTGACA 4290017
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || ||||| |||| || ||
Sbjct 4290018 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTC 4290077
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 4290078 ACAAAGATCTGCAT 4290091
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || ||| |||||| || ||||| |||| |
Sbjct 4289442 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCA 4289501
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || || || ||||| ||| || || |
Sbjct 4289502 AAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACA 4289561
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || || || |||| || ||
Sbjct 4289562 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTC 4289621
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 4289622 ACGAAGATCTGCATG 4289636
>seq174
Length=4297676
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||| ||||||| | || ||| | ||| || ||||| || || |
Sbjct 3533491 GACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCG 3533432
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | ||| || || ||||| || ||||| || || ||| || ||||
Sbjct 3533431 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 3533372
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| ||| || || || | || || | ||||| || | || || || | || |||||
Sbjct 3533371 TTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTC 3533312
Query 138601 ACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 3533311 ACAAAAATCTGCAT 3533298
>seq33
Length=6086033
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/195 (70%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || ||| || || || ||||| || || | |
Sbjct 2214802 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 2214861
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539
| || || | ||| || || ||||| || ||||| || || ||| | |||| ||||
Sbjct 2214862 AATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGAATCTTTGCCTTTAC 2214920
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| ||||| || | | | || ||||||| || | || || || || || |||||
Sbjct 2214921 ATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTT 2214980
Query 138600 TACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 2214981 CACGAAAATCTGCAT 2214995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496238250630960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |