Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq29 104 2e-17
seq395 100 2e-16
seq59 93.3 3e-14
seq33 93.3 3e-14
seq530 89.7 4e-13
seq174 86.0 4e-12
seq75 86.0 4e-12
>seq29
Length=5782310
Score = 104 bits (114), Expect = 2e-17
Identities = 158/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 14961 TCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAAT---TCT 15017
||| || || | |||||| || || || ||||| |||||||| || || ||| | |
Sbjct 156626 TCTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTGTGT 156569
Query 15018 CGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTC 15077
| | ||||| ||||| |||||||| | |||| | ||| || || |||||||||||
Sbjct 156568 C-CATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 156510
Query 15078 CTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGT 15137
||| | ||| ||| |||||| ||||||| ||||| |||| || || | ||
Sbjct 156509 CTTATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGT 156450
Query 15138 AATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
||||| || ||||| || ||||| || ||||| ||||| ||
Sbjct 156449 GATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTT 156408
>seq395
Length=2662522
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 955164 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 955223
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| ||||||| | |||| | ||| || || |||
Sbjct 955224 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGA 955283
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||| || | | ||| ||| |||||| ||||||| ||||| | ||| ||
Sbjct 955284 ATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACC 955343
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | |||||||| || || || || ||||| || ||||| ||||| ||
Sbjct 955344 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393
>seq59
Length=2579055
Score = 93.3 bits (102), Expect = 3e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 14951 CACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGA 15010
|||| || | ||| || || | |||||| || || || ||||| |||||||| || |
Sbjct 1130453 CACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACA 1130512
Query 15011 GAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAA 15070
| | | | ||||| | ||| |||||||| | |||| | ||| || || ||||
Sbjct 1130513 AAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAA 1130572
Query 15071 TTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGT 15130
|||||||||| || ||| ||| |||||| ||||||| ||||| ||| ||
Sbjct 1130573 TTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCG 1130632
Query 15131 CTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 1130633 CGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678
>seq33
Length=6086033
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 2214769 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 2214828
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| |||||| | ||| || || |||
Sbjct 2214829 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGA 2214888
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||||||||||| || ||| ||||| |||||| |||| || ||| | ||| ||
Sbjct 2214889 ATTCCTTCCTTATCCTGAATCTTTGC-CTTTACATTTTCCATTGTACCCGAGGGTTCAAC 2214947
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 2214948 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995
>seq530
Length=2118653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || || | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 63786 CCTCCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 63845
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| | |||| | ||| || || | |
Sbjct 63846 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAA 63905
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || ||| ||| |||||| ||||||| ||||| ||| ||
Sbjct 63906 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 63965
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 63966 TCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012
>seq174
Length=4297676
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | | ||| || || | |||||| || || || ||||| ||| |||| || |
Sbjct 3533524 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 3533465
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | || |||||| | ||| ||||||||| | |||| | ||| || || |||
Sbjct 3533464 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGA 3533405
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || || ||| |||||| |||||| ||||| ||| |
Sbjct 3533404 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATC 3533345
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | || ||||| || || | || ||||| |||||||| ||||| ||
Sbjct 3533344 TCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 3533295
>seq75
Length=4930459
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | |||||| || | |||||| || || || ||||| |||||||| ||
Sbjct 2283651 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 2283710
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||| | | ||| |||||||| | ||||| | ||| || | |||
Sbjct 2283711 AAAGTGCGTCCATCTCCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGGA 2283770
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || ||| ||| |||||| |||||| ||||| ||| |
Sbjct 2283771 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGCC 2283830
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
| | || ||||| || || || || ||||| || ||||| ||||| ||
Sbjct 2283831 TTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 2283880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357375043201505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |