Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq314 107 2e-18 seq47 102 8e-17 seq85 100 3e-16 seq59 96.9 3e-15 seq949 95.1 1e-14 seq33 95.1 1e-14 seq530 91.5 1e-13 seq1198 87.8 2e-12 seq1114 87.8 2e-12 seq395 86.0 6e-12 seq199 86.0 6e-12 seq174 86.0 6e-12 seq128 82.4 7e-11 >seq314 Length=2398313 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || |||||||| || ||||| || || | Sbjct 2323422 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 2323481 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| || || | |||| |||||||| || || || Sbjct 2323482 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG 2323541 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| |||||| |||| | || | ||||| | |||||| Sbjct 2323542 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 2323601 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || ||||| ||||| || || ||||| |||||||| Sbjct 2323602 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq47 Length=4803410 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| |||| || | || ||||| || || || ||||| || || ||||| Sbjct 4289418 AAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4289477 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 || || |||||||| || || ||||||| | |||||| || || || ||||||||| Sbjct 4289478 CCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 4289537 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 |||||| ||| ||| ||||| | |||| |||||| | ||| || || | || Sbjct 4289538 TTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTG 4289597 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || |||||||||| || || || || ||||||||| Sbjct 4289598 ATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATG 4289636 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || ||||| || || || ||||| || || ||||| Sbjct 4289649 CGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCG 4289708 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || ||||||| | |||||| || || || |||||||||||| Sbjct 4289709 TCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 4289768 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| ||| ||||| | |||| |||||| | ||| || || | ||| | Sbjct 4289769 TCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4289828 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||||||||| || || || || ||||||||| Sbjct 4289829 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATG 4289864 >seq85 Length=4131313 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || |||||||| || ||||| || || || || || ||| || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || || | |||| |||||||| || || || |||||||||||||| Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| | || | | ||| | |||||| |||| ||| | || || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| |||||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq59 Length=2579055 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 126888 CACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCA 126947 |||| || | || |||||| | ||| | || ||||| |||||||| ||||| || || Sbjct 1130453 CACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACA 1130512 Query 126948 TCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTA 127007 ||||| ||| || || || || ||||| |||||| || ||||||||| ||||| | Sbjct 1130513 AAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAA 1130572 Query 127008 TGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTT 127067 | || ||||| ||| || || ||| | | ||| | || |||| | || || Sbjct 1130573 TTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCG 1130632 Query 127068 CGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || | || || || || || ||||| || ||||||||||| Sbjct 1130633 CGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 >seq949 Length=596474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || ||||| || ||| Sbjct 262184 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 262243 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || |||||||| || || ||| || ||| Sbjct 262244 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 262303 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||||| |||||| | ||| || || | ||| | || ||||||||||| || Sbjct 262304 ACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 262363 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 262364 TTCACAAAGATCTGCAT 262380 >seq33 Length=6086033 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | || ||||| |||||||| ||||| || Sbjct 2214766 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 2214825 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| ||| || || || || ||||| | |||| || ||||||||| ||| Sbjct 2214826 GACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGA 2214885 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTC 127062 || || || ||||| ||| ||| | | ||| || | | ||| | || ||| || Sbjct 2214886 GGAATTCCTTCCTTATCC-TGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTC 2214944 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || || || ||||| || ||||||||||| Sbjct 2214945 AACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq530 Length=2118653 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || || || | || |||||| | ||| | || ||||| |||||||| ||||| || Sbjct 63783 GCACCTCCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 63842 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| ||| || || || || ||||| |||||| || ||||||||| ||| Sbjct 63843 GACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGA 63902 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 | || || ||||| ||| || || ||| | | ||| | || |||| || Sbjct 63903 GAAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 63962 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || || || ||||| || ||||||||||| Sbjct 63963 ACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012 >seq1198 Length=804178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || ||||||||||| | ||||| ||| || ||||| || ||| Sbjct 573909 GTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 573850 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | |||||| || || || |||||||| || || ||| ||| ||| Sbjct 573849 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC 573790 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| |||||| | ||| || || | ||| | || |||||||| || || Sbjct 573789 ACGTTTTCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTC 573730 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 573729 TTCACGAAGATCTGCATG 573712 >seq1114 Length=1661397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | ||||| ||| || ||||| || ||| Sbjct 1502932 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 1502991 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || |||||| || || || |||||||| || || ||| ||| ||| Sbjct 1502992 GCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC 1503051 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| ||| || | ||| || || | ||| | || ||||||||||| || Sbjct 1503052 ACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1503111 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 1503112 TTCACGAAGATCTGCATG 1503129 >seq395 Length=2662522 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | || ||||| |||||||| ||||| || Sbjct 955161 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 955220 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| ||| || || || || |||| |||||| || ||||||||| ||| Sbjct 955221 GACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGA 955280 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || || || | || || ||| | | ||| | || |||| | || Sbjct 955281 GGAATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCA 955340 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || || || ||||| || ||||||||||| Sbjct 955341 ACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 955390 >seq199 Length=3010087 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || |||||||| || ||||| || || | Sbjct 689123 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 689064 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 || || ||| || |||||||| || || | ||| | |||||| || || || Sbjct 689063 CGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGG 689004 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| |||||| |||| | || |||||| | ||| || Sbjct 689003 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACC 688944 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || ||||| ||||| || || ||| | |||||||| Sbjct 688943 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAGAGATCTGCAT 688897 >seq174 Length=4297676 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| | | || |||||| | ||| | || ||||| |||||||| |||| || Sbjct 3533527 GCACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCA 3533468 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || | || || || || || |||||| |||||| || ||||||||| ||| Sbjct 3533467 CACAAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGA 3533408 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| || || || | || Sbjct 3533407 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCA 3533348 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || || || | || ||||| |||||||||||||| Sbjct 3533347 ATCTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 >seq128 Length=2980057 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || |||||||| || ||||| || || || || || ||| | Sbjct 204320 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTT 204379 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || || | |||| ||||||| || || || |||||||||||||| Sbjct 204380 CAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 204439 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| | || | ||||| | ||| || |||| ||| || || | Sbjct 204440 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCGAGGGTGACGGTCTC 204499 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| |||| || || ||||| |||||||| Sbjct 204500 GCC-TTCAGGGTCTTCACAAAGATCTGCAT 204528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475477660942320