Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq29 93.3 4e-14
seq314 91.5 1e-13
seq85 82.4 7e-11
>seq29
Length=5782310
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| |||||||| ||||| || || ||||||||||| || || || || | || |
Sbjct 156628 AGTCTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGT 156569
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| |||||||| || || || | |||| || ||||| || || ||||| |||||
Sbjct 156568 CCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 156509
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|||| ||||| || || | ||||| || || || | || || ||||||||
Sbjct 156508 TTATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTG 156449
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || || ||||| || ||||| ||||||
Sbjct 156448 ATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATC 156410
>seq314
Length=2398313
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || || || ||||||||||| |
Sbjct 2323419 ATGCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGT-- 2323476
Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||||| | | | ||| |||| ||||| || || | |||| || |||||||| |
Sbjct 2323477 CTGACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAG 2323536
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
|||| ||||| || || ||||| ||||| ||||| || | ||||| | ||
Sbjct 2323537 GCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCT 2323596
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||| ||||| || | || ||||| || || || || ||||| || ||||||
Sbjct 2323597 CGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 2323649
>seq85
Length=4131313
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAATT 45195
||||| || || || || ||||||||||| | ||||| | | | ||| |||| |
Sbjct 1818208 TGCAGGGTGGACTCTTTCTGGATATTATAGT--CTGACAGAGTACGGCCATCTTCCAGCT 1818265
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
|||| || || | |||| || |||||||| ||||| ||||| || || ||||| ||||
Sbjct 1818266 GTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTT 1818325
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| ||||| || | | ||| | |||||| ||||| || | || ||||| |
Sbjct 1818326 TGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTG 1818385
Query 45316 TTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || ||||| || ||||||
Sbjct 1818386 TCAGGGTCTTCACAAAGATCTGCATC 1818411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451981204394280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |