Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 4e-14 seq314 91.5 1e-13 seq85 82.4 7e-11 >seq29 Length=5782310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || |||||||| ||||| || || ||||||||||| || || || || | || | Sbjct 156628 AGTCTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGT 156569 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||||||| || || || | |||| || ||||| || || ||||| ||||| Sbjct 156568 CCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 156509 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 |||| ||||| || || | ||||| || || || | || || |||||||| Sbjct 156508 TTATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTG 156449 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || || || || || ||||| || ||||| |||||| Sbjct 156448 ATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATC 156410 >seq314 Length=2398313 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || || || ||||||||||| | Sbjct 2323419 ATGCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGT-- 2323476 Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||||| | | | ||| |||| ||||| || || | |||| || |||||||| | Sbjct 2323477 CTGACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAG 2323536 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 |||| ||||| || || ||||| ||||| ||||| || | ||||| | || Sbjct 2323537 GCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCT 2323596 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||| ||||| || | || ||||| || || || || ||||| || |||||| Sbjct 2323597 CGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 2323649 >seq85 Length=4131313 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAATT 45195 ||||| || || || || ||||||||||| | ||||| | | | ||| |||| | Sbjct 1818208 TGCAGGGTGGACTCTTTCTGGATATTATAGT--CTGACAGAGTACGGCCATCTTCCAGCT 1818265 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || || | |||| || |||||||| ||||| ||||| || || ||||| |||| Sbjct 1818266 GTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTT 1818325 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||||| || | | ||| | |||||| ||||| || | || ||||| | Sbjct 1818326 TGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTG 1818385 Query 45316 TTAGAGTTTTTACAAAAATTTGCATC 45341 | || || || ||||| || |||||| Sbjct 1818386 TCAGGGTCTTCACAAAGATCTGCATC 1818411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451981204394280