Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq265 165 1e-35
seq565 109 8e-19
>seq265
Length=2706884
Score = 165 bits (182), Expect = 1e-35
Identities = 217/301 (72%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934
||| | ||| || | || ||||| |||||||| || || ||||| |||||||| |
Sbjct 501303 AACACTGAATGCAGTAAAAGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTGA 501244
Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994
|| || || | ||| | || ||||| || || || || ||||| || |||||||| |
Sbjct 501243 GGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGTC 501184
Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054
||||| |||||| || |||| || ||||||||||| || || || |||| || |
Sbjct 501183 AGGGGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGCGCTCCCATTTCTAC 501124
Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114
||| ||||||| ||||||||| | ||||| || ||||| | | || | ||| || ||
Sbjct 501123 CATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTAGCAGGAGGGCAGGATACAG 501064
Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174
||| | || || | || ||||| ||||| || ||| | ||||| || |||||||| ||
Sbjct 501063 TTCCATGGCATCAATATCACCATAAAGGGCCTCTAACCCCGCAGCCATTTCCTTCTCTCC 501004
Query 9175 T 9175
|
Sbjct 501003 T 501003
Score = 152 bits (168), Expect = 7e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798
|| || || | | |||| ||| |||| || || || || ||||| || |||||||| ||
Sbjct 499881 GTCTGGAATAGCCGCTCATCATCCCACTCTGGATGCTCCTGTTTAAGCACATCGCACACT 499822
Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858
||||||||||| | ||||| || |||||||||||||| | ||| ||||| | || ||
Sbjct 499821 CTGTTGTGTTCCCGTAGCCAAATTGTGGCGTACATCATCAGACCAGGCACCAGCCCGAAG 499762
Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918
||||| | ||||| ||||| || || | || || || | ||| | || | ||| | |
Sbjct 499761 ACTTCCTGGCCCACAGCAAACCGTAGGTGTTCAGGAACATGGGGTGGGTAGATCATCTCC 499702
Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCT 9967
||||| || |||||||| ||||| ||||||| || || ||||| ||||
Sbjct 499701 ACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACCT 499653
Score = 122 bits (134), Expect = 1e-22
Identities = 133/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180
|||||||||||| |||| |||| | |||||||| || |||||| ||| ||| | ||
Sbjct 498820 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 498761
Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240
|||||| || || ||||| || | || || || ||||||| || ||||||||||||||
Sbjct 498760 AAATTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 498701
Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297
|| || || | || | | || || ||| |||||||||| | ||||||| || ||
Sbjct 498700 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTTGAATCAGGAAG 498644
Score = 105 bits (116), Expect = 1e-17
Identities = 196/286 (69%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
||||||||||| || |||| || || || || |||| | || || | | | ||
Sbjct 500482 CCGGCAATCTGCCTGCTGAATGACTCCACAAACTGGGTAAGCCCATGTTCCAGCAATATA 500423
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||||| | || || | | || |||| | ||| |||| | || |||
Sbjct 500422 GAGTTGTTGTAGATAAACTGCTGGAAATTGTACTCCTGGTCATCTATTTGCAAGGTGTCA 500363
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| || | ||||||| ||||||| || || ||||| || || || ||||| ||||||
Sbjct 500362 GGCAGAAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATACGGTTTTGGTAC 500303
Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673
|| || | ||| ||| || | ||| |||||||| | |||| ||||| || ||||
Sbjct 500302 TGGAATTGTTGGT--TGAAAAGCAGCTCTGGGTCAAACTTCAGCTTGAAGTAATAGCCGC 500245
Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719
| | ||||| || || | | || | ||| ||||||||||| ||
Sbjct 500244 TCAAGTGCTGTACGTAGTCTTCAATCACAATCTTAATGGTTTCTCC 500199
Score = 104 bits (114), Expect = 3e-17
Identities = 113/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446
||||||||||| || | || || || |||||| || || || || |||| ||| ||
Sbjct 498227 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGCCACAGGGGGAAGAGCTCTGGTG 498168
Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506
|| ||||| ||||| || || ||||||||||| || |||||||| || | ||||||
Sbjct 498167 TAGTAGGAGAGATTGGAGAAGGCTTCCCAGCTTTTATAGCCATAGTCCACGTTGTAAGTT 498108
Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536
|| ||||| ||||||| | |||||||||
Sbjct 498107 GGTGGACTCTCAATCAAATGTGACCTGGCT 498078
>seq565
Length=1946861
Score = 109 bits (120), Expect = 8e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 8963 TCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGC 9022
|| || || || ||||| |||||||||||| | || ||||||||| ||| | | |||
Sbjct 1920266 TCACCACCAAATGTGCTCGGTTTCCAGTACTCTGGAGAGCAGATGGGATTCCCTAGGAGG 1920207
Query 9023 CCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGA 9082
|| || | |||||| |||||||| | || || || ||||| || ||||||| |||
Sbjct 1920206 CCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATACTCTCCCCAAAGATGGAGTTTGGA 1920147
Query 9083 CGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAG 9141
| || || | || | || || | ||||| || | || |||| ||| ||||| ||
Sbjct 1920146 TGGCACTTCTCCA-GAAGCAGCCCCGGGTAGAACTCCAAGGCATCGATGTCTCCATACAG 1920088
Query 9142 GGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
| ||||||||||| || ||||||||||| |||
Sbjct 1920087 CTCCTCCAACTCGGCTGCGATCTCCTTCTCCCCT 1920054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723692781586200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |