Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq314 118 1e-21 seq949 113 5e-20 seq1198 109 6e-19 seq85 109 6e-19 seq1114 98.7 1e-15 seq199 95.1 1e-14 seq230 86.0 7e-12 >seq314 Length=2398313 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || ||| || |||||||| ||||| || ||||| || | || || Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| ||||| || || |||| ||||||||||| | ||| | || ||||||||| Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || |||| || | | ||||| || | || || || | |||||||| || Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || || |||||||| ||||| Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq949 Length=596474 Score = 113 bits (124), Expect = 5e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| || | || ||| || ||||| ||||| || || Sbjct 262153 GCCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGA 262212 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||| | || Sbjct 262213 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 262272 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||| || || |||||| ||| | | | | ||||| || | ||||| Sbjct 262273 GATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 262332 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 262333 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 262384 >seq1198 Length=804178 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| ||||| | ||| | ||||| || | || ||| || ||||||||||| || || Sbjct 573940 GCCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGA 573881 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||| | || Sbjct 573880 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 573821 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCA-CCGTGTCGCTCGATTCCA 46544 | || ||| || || ||||||| ||| | ||| || ||||| || | |||| Sbjct 573820 GATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGTTTTCAGTGGTGTCACTGGGCTCCA 573762 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 573761 CCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 573713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||||| |||| || ||| || ||||| || || || | Sbjct 573713 TGCCACCCCTCAGGCGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAG 573654 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||| | | || || ||||||||||| || || || | | ||||||||| | | Sbjct 573653 AAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGG 573594 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || || || |||||| ||| | | | | ||||| || | || | Sbjct 573593 GGATGCCCTGTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTA 573534 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | || | ||||||| ||||| ||||| || || || ||||| ||||||||| Sbjct 573533 CCTCTAGGTTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 573481 >seq85 Length=4131313 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || ||| || |||||||| ||||| || ||||| || | || || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| ||||| || || |||| ||||||||||| | ||| | || ||||||||| Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || |||| || | | | ||| || | || || || | |||||||| || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || |||||||| ||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq1114 Length=1661397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||| || || |||||||| | || || ||||||||||| || || Sbjct 1502937 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 1502996 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | || ||| || || ||||||| ||| | ||| Sbjct 1502997 GATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGT 1503055 Query 46522 CGCCA-CCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 || || || || | ||||| |||| |||||||| ||||| ||||| || || | Sbjct 1503056 TTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 1503115 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 1503116 CGAAGATCTGCAT 1503128 >seq199 Length=3010087 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || ||| || |||||||| ||||| || |||| || | || || Sbjct 689106 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACCGAGTACGGCCATCTTC 689047 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| ||||| || || ||| | ||||||||| | ||| | || ||||||||| Sbjct 689046 CAGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 688987 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || |||| || | ||||| || | || || || | |||||||| || Sbjct 688986 GATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTT 688927 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || || ||| |||| ||||| Sbjct 688926 GCCCGTCAGGGTCTTCACAGAGATCTGCAT 688897 >seq230 Length=4445898 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||| |||| ||||| || ||||| || |||| || ||| | ||||| || || Sbjct 2146111 CTCTTTCTGGCTATTATAGTCTGACAGAGTACGGCCGTCTTCCAGCCGTTTGCCCGCAAA 2146052 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | || |||||| | ||| | || ||||| ||| ||| || |||| | Sbjct 2146051 AATCAGACACTACTGGTCAGGCGGGATGCCCTCCTGGTCTTGGATTTTGGCTTTGACATT 2145992 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || | | || | | |||||||| ||||||||||| || || || Sbjct 2145991 CTCAGTGGTGTCACTGGGCGCGACCTTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 2145932 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 2145931 AAAGATCTGCAT 2145920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565210894086360