Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 367 1e-96
seq417 250 3e-61
seq1832 246 3e-60
seq158 120 3e-22
seq148 111 2e-19
seq3 107 2e-18
>seq1020
Length=850931
Score = 367 bits (406), Expect = 1e-96
Identities = 652/940 (69%), Gaps = 17/940 (2%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | ||||||||||||| || || || ||| | ||||||
Sbjct 339105 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCATTCCCATC 339048
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||||||| | ||||| || |||||| ||||| || || || | ||| |||
Sbjct 339047 CTCTGATATTCGCCTACTCTCTTCTCAAAG---TTAGTCTTCCCTTCCAGTGAAATATTC 338991
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||||| ||| | | | || || |||| || | |
Sbjct 338990 TCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATA 338931
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
|||| || || || || | |||||| ||||| | |||||||| || || |
Sbjct 338930 AGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAATGAGC 338871
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|| ||||| | || || || || || || || ||||| || || | | ||| | ||
Sbjct 338870 TTCACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCAT-TAATA-ATTA 338813
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATA--GA--AGATGTTTAAACATCAAACATGC 18965
| | | || ||| | | ||| ||| | || || ||||| ||||||| || ||
Sbjct 338812 TTTCCTTCACTCTCTGC--TCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGC 338755
Query 18966 AAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGG 19025
||| ||||| |||| ||||| ||||| || | | |||||| ||||| | | |||||
Sbjct 338754 AAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCCAGG 338695
Query 19026 CATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACC 19085
|||||| || | ||| || | ||||||||| || ||||| || |||||||||| || ||
Sbjct 338694 CATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGATTCC 338635
Query 19086 TTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCA 19145
||| || || |||||||| || | | ||| || || || | || || | | ||||
Sbjct 338634 TTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGTCCA 338575
Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205
| || |||||||| |||||||| |||||||| ||||||||||| || | || || ||
Sbjct 338574 ATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAAGAG 338515
Query 19206 ATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGA 19265
| | | || | | |||||||| ||| | || | | | ||||||||| || ||
Sbjct 338514 AAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTCAGA 338455
Query 19266 ATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTAC 19325
||| || ||||| || || | || || | || ||||| | |||||||| ||||| ||
Sbjct 338454 ATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAAC 338395
Query 19326 TTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAA 19385
||| | ||| | || ||||| |||||||| || || |||||||| |||||||| ||
Sbjct 338394 TTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAAGAA 338335
Query 19386 TGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAA 19444
|| | || || ||||| | | | || || | | || | | ||| ||| | | ||
Sbjct 338334 AGCCAGAACGTGGGATATAAAGTATCTCTCCTCAG-GCTTCAGGGATTCCCAGTGCTGAA 338276
Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504
| || || || | ||| || | |||| |||||||||| |||||||| ||||| ||||||
Sbjct 338275 TGTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACC 338216
Query 19505 TGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
| | ||| ||||||| || | || || || || |||||
Sbjct 338215 TCTGCCAAATATCACAGTACTCGATGGGGAAGATGACAAA 338176
>seq417
Length=2207251
Score = 250 bits (276), Expect = 3e-61
Identities = 496/725 (68%), Gaps = 16/725 (2%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | ||||||||||||| || || || ||| | ||||||
Sbjct 863619 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCATTCCCATC 863676
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || ||||||| ||||| || || || | ||| |||
Sbjct 863677 CTCTGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTC 863736
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||| | ||||||||||||| ||| | | || || |||| || | |
Sbjct 863737 TCCATATAGTCAAATGGATTTTCTACTCCGAAAACCTTGCCAAAACCTAGCTCCAGCATA 863796
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCA--CAATTCATTCCTATTA 18847
|||| || || || || | |||||| ||||| || || |||||||| || || |
Sbjct 863797 AGTCGGTCTGCCACGAACTCAATATACTGCTTCAT--TAACATGCAATTCATCCCAATGA 863854
Query 18848 ATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA 18907
| || | || | || || | | ||| | || ||||| | || || | | ||| |
Sbjct 863855 ACTTCATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCAT-TAATA-AT 863912
Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATA--GA--AGATGTTTAAACATCAAACAT 18963
|| | | | || || | | ||| ||| | || || ||||| ||||||| ||
Sbjct 863913 TATTTCCTTCACTCCCTGC--TCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAG 863970
Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023
||||| ||||| |||| ||||| ||||| || || | |||||| ||||| || | |||
Sbjct 863971 GCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCA 864030
Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATA 19083
|||||||| | | ||| || | ||||||||| || |||| || ||||||||||| ||
Sbjct 864031 GGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAGATT 864090
Query 19084 CCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATC 19143
||||| || || ||||| | || | | ||| || || |||| || || | |||
Sbjct 864091 CCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCGATC 864150
Query 19144 CATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAAT 19203
|| || ||||| | |||| ||| |||||||| ||||||||||| || | || ||
Sbjct 864151 CAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTGAAG 864210
Query 19204 AGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
||| | | || || | |||||||| || | || || | | ||| ||||| ||
Sbjct 864211 AGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATCTCA 864270
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
|||||||| ||||| || | || || || || || ||||| | |||||||| |||||
Sbjct 864271 GAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGA 864330
Query 19324 ACTTC 19328
|||||
Sbjct 864331 ACTTC 864335
>seq1832
Length=302895
Score = 246 bits (272), Expect = 3e-60
Identities = 625/935 (67%), Gaps = 23/935 (2%)
Strand=Plus/Plus
Query 18624 ATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATTTTTTGATATTCG 18681
|||||| | ||||||||||| | || || || ||| ||||| || | ||||| ||
Sbjct 206416 ATCCAAGGTAAAAGAATTCTTTG--TTGGACTTGACATCACTCCTATCCTCTGATACTCA 206473
Query 18682 GCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCCATAAAATCA 18741
| |||| || ||||||| ||||| || || || | ||| ||| ||||||| |||
Sbjct 206474 CCTCCTCTCTTCTCAAAGAGGTTAGTCTTCCCTTCCAGTGAAATATTCTCCATAAGGTCA 206533
Query 18742 AATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCT 18801
|||||||||| ||| | | | || | || |||| ||| |||| || ||
Sbjct 206534 AATGGATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTGCCTAAGTCAGTCTGCC 206593
Query 18802 ACAAATTTAATATA-TGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAG 18860
| |||| |||||| || || | | || |||||||| || || | || | || |
Sbjct 206594 ATGAATTCAATATACTGCTTTATTAACATG-CAATTCATCCCAATGAGCTTCAGCGGCAA 206652
Query 18861 TGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACAACTCT 18920
|| |||| || || || || ||||| | || || | ||||| | || | | | ||
Sbjct 206653 GGCCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCTT-TGATA-ATTATTTCCTTCACT 206710
Query 18921 ATCTTCATTAGGAGGGT-ATAGA--AGATGTTTAAACATCAAACATGCAAAATCACAATG 18977
||| | | | ||| | || || || ||||| ||||||| | ||||| |||| ||
Sbjct 206711 CTCTGCTCT-GAAGGTTTATGGACCAGGTGTTTGAACATCAGGTAGGCAAAGTCACGGTG 206769
Query 18978 TAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAAT-GTTAAACCAGGCATCAGTCCTC 19036
|| ||||| ||||| || || | ||||| ||||| || | ||||||||||| | |
Sbjct 206770 TAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACAGTGAGGCCAGGCATCAGGCTGC 206829
Query 19037 ttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTG 19096
||| || | |||| |||| | ||| | || ||| ||||| | || ||||| || |
Sbjct 206830 ATTTCTTGAGCCAGTATATCAACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAG 206889
Query 19097 CAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCC 19156
|||| | || | | ||| || || |||| || || | || ||| | || ||||
Sbjct 206890 CAAAGTCCACAACCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCCAATGCAAGGCCC 206949
Query 19157 AATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCT 19216
||| |||||||| || |||| ||||||||||| || | || || ||| | | ||
Sbjct 206950 AATTTGCCTTCTTCCTTCCACAAGGCATTGTCTCCATGGTGTTGAAGAGAAATTCCCTCT 207009
Query 19217 CATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTT 19276
| | | ||||| | ||| | || | | | ||| |||| || ||||| || ||||
Sbjct 207010 CTTTGGAATCTT--ATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTT 207067
Query 19277 CTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAA 19336
| || || || || || || || ||||| | |||||||| ||||| || || | |
Sbjct 207068 CCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTGAACCTCTTGGCCAC 207127
Query 19337 ATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTA------ 19390
| | || ||||| |||||||| ||||| ||| |||| || |||| || || |
Sbjct 207128 ACCACTCCACCAAGTTTTCATTTACTATGCCAACACTTGCCACAAAGAAAGCCAGAACGT 207187
Query 19391 ATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAATATCT 19449
|| || ||||||| | | || || | | || | | ||| ||| | | ||| ||
Sbjct 207188 GAACGTGGGGTATAAAATCTCTCTCCTCAG-GCTTCAGGGATTCCCAGTGCTGAATGTCC 207246
Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509
|| || | || || |||| | ||||||||||||||||||| ||||| ||| |||| | |
Sbjct 207247 TTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAGAAGCCTCAGCTTTCTTACACATCTGC 207306
Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAA 19544
|| | |||| |||| | ||||| || || | |||
Sbjct 207307 CAAAGATCATGATACTCCATAGGGAAGATGAGAAA 207341
>seq158
Length=7371824
Score = 120 bits (132), Expect = 3e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044
|| ||||| || || | |||||| ||||| || | || ||||| || |||||||| |||
Sbjct 3463986 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 3463927
Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104
| ||||||||||| |||||| ||||| || ||||| || |||||||| || ||||||||
Sbjct 3463926 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 3463867
Query 19105 ACTAGTCTTTCTCC 19118
|| | |||||| ||
Sbjct 3463866 ACAACTCTTTCCCC 3463853
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 18672 TTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTC 18731
|||||| || ||||||| ||| ||||||||||| ||||| || ||||| || || ||
Sbjct 3477012 TTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTCTC 3476953
Query 18732 CATAAAATCAAATGGATTTT 18751
|||||||||||| |||||||
Sbjct 3476952 CATAAAATCAAAGGGATTTT 3476933
>seq148
Length=4816872
Score = 111 bits (122), Expect = 2e-19
Identities = 115/149 (77%), Gaps = 4/149 (3%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | ||||||||||||| || || || ||| ||||||||
Sbjct 2360426 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 2360483
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || |||||||| ||||| || || || | ||| |||
Sbjct 2360484 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTC 2360543
Query 18730 TCCATAAAATCAAATGGATTTTTTACATT 18758
|||||||| ||||||||||||| ||| ||
Sbjct 2360544 TCCATAAAGTCAAATGGATTTTCTACTTT 2360572
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | |||||| ||||| || | ||||||||||| || | ||| |
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||||||||| || ||||| || ||||||||||| || ||||| || || |||||||
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 19103 CAACTAGTCTTTCTCC 19118
| || | | ||||||
Sbjct 2362269 CCACAACCCGTTCTCC 2362284
>seq3
Length=9835568
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
||||||||||| || | ||||| || |||| || || || ||||| ||||| || ||
Sbjct 152609 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 152668
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447
||||||||||| | ||| ||||||||||| || |||||||| | |||| | ||| ||
Sbjct 152669 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 152728
Query 47448 TTTCTTACTCCATA 47461
||||||| |||||
Sbjct 152729 TTTCTTATACCATA 152742
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/172 (73%), Gaps = 6/172 (3%)
Strand=Plus/Plus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| || |||||||||||||| || | ||| ||| |||| || | || || || |
Sbjct 150104 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCGATGTGGATGT 150163
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| | |||||| || |||||||| || |||||||| ||||||||||| | || |||
Sbjct 150164 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCT---TAAGAACGG 150220
Query 47170 TT---TGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218
|| |||| || ||||| || || ||||||| ||| || | ||| || ||
Sbjct 150221 TTTTCTGTGAAATTTCCCACACGGTCTTATAAAGTTGCTTCAGGTCATCAGG 150272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562081446380520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |