Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 210 3e-49
seq417 150 2e-31
seq1832 120 4e-22
seq158 114 2e-20
seq148 93.3 5e-14
>seq1020
Length=850931
Score = 210 bits (232), Expect = 3e-49
Identities = 332/473 (70%), Gaps = 2/473 (0%)
Strand=Plus/Minus
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||| |||| | || ||||| ||||| |||||||| |||||||| || | | ||||||
Sbjct 338772 TTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATT 338713
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
||||||| | || ||||| | || | ||| || | ||| ||||| | |||||||||
Sbjct 338712 GGAAAAGGCGAGGCCAGGCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGA 338653
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342
|||||||||| || ||||| || || ||||| || |||| ||| ||| | ||
Sbjct 338652 ACCAGAAAAGAGGATTCCTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACC 338593
Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402
| || | |||| | | |||||||||||| || ||||| |||||
Sbjct 338592 CTCTTTGTCCCCAGTCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT 338533
Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462
|| || || || |||||||| | |||||| |||| | |||||||| ||| | ||
Sbjct 338532 CTCGATGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAG 338473
Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522
| ||| ||||| ||||| || || ||||| || || | || || |||| ||||| |
Sbjct 338472 GAGACTGTACATCTCAGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCG 338413
Query 37523 AGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581
||||| | |||| ||||| || | ||||| || | ||||||||||| || || |
Sbjct 338412 GGCTTCTG-TAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGC 338354
Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634
||||||| |||||||||||||| ||||| | |||||| | ||| || |||
Sbjct 338353 CATCACTCGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCA 338301
>seq417
Length=2207251
Score = 150 bits (166), Expect = 2e-31
Identities = 264/382 (69%), Gaps = 2/382 (1%)
Strand=Plus/Plus
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||| |||| | || ||||| ||||| |||||||| |||||||| || || | ||||||
Sbjct 863955 TTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATT 864014
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
||||| || | || ||||| | | | ||| || | ||| ||||| | |||||||
Sbjct 864015 GGAAAACGTGAGGCCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGA 864074
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342
||||||||||| || ||||| || || ||||| | |||| ||| ||| | || |
Sbjct 864075 ACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGC 864134
Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402
| || ||||| | ||| |||||| || ||||| |||||
Sbjct 864135 CTCTTTGTCCCCGATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGT 864194
Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462
|| || || || |||||||| | ||||||| |||| | || ||||| ||||| ||
Sbjct 864195 CTCCATGGCGTTGAAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAG 864254
Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522
| ||||||||| ||||| ||||| ||||| || | || || || ||||| ||||| |
Sbjct 864255 GAGACTATACATCTCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCG 864314
Query 37523 AGCTTCAGATAAT-TGAACATC 37543
||||| | |||| ||||| ||
Sbjct 864315 GGCTTCTG-TAATCTGAACTTC 864335
>seq1832
Length=302895
Score = 120 bits (132), Expect = 4e-22
Identities = 287/432 (66%), Gaps = 3/432 (1%)
Strand=Plus/Plus
Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG-GTTAATCC 37237
||||| |||| |||||||| |||||||| || || | ||||| ||||| || | ||
Sbjct 206756 GCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACAGTGAGGCC 206815
Query 37238 TGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAAT 37297
||||| | | | ||| || | ||| |||| ||| |||| ||| ||||| | ||
Sbjct 206816 AGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGAAGAACCAAAAAAGGAGAT 206875
Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357
||||| || ||||| | |||| | | ||| | || | | || ||
Sbjct 206876 TCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAAC 206935
Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417
||| | | ||||| |||||| | |||| ||||| || || | || ||
Sbjct 206936 CCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCATTGTCTCCATGGTGTTGAA 206995
Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477
|||||| | | |||| |||| ||||||||| ||| | || | |||| |||| ||
Sbjct 206996 GAGAAATTCCCTCTCTTTGGAATCT--TATATAAGTGTCAGTGAGGAGACTACACATCTC 207053
Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537
||| || || ||||| || || || || || ||||| ||||| | ||||| | | ||
Sbjct 207054 AGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTG 207113
Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597
||| || | | ||| || | ||||||||||| ||||| ||| |||| || ||||
Sbjct 207114 AACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTATGCCAACACTTGCCACAAA 207173
Query 37598 GAAAGCAAGAAC 37609
|||||| |||||
Sbjct 207174 GAAAGCCAGAAC 207185
>seq158
Length=7371824
Score = 114 bits (126), Expect = 2e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||||||||| || || | |||||| ||||| || | ||| ||||| | ||||||||| |
Sbjct 3463988 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCT 3463929
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| |
Sbjct 3463928 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAAG 3463869
Query 37318 CTACAA 37323
| ||||
Sbjct 3463868 CCACAA 3463863
>seq148
Length=4816872
Score = 93.3 bits (102), Expect = 5e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||| |||||||| | || ||||| | || | ||| ||
Sbjct 2362151 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 2362210
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||| | |||||||| ||||||||||| || ||||| || || ||||| ||
Sbjct 2362211 AGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 2362270
Query 37320 ACAA 37323
||||
Sbjct 2362271 ACAA 2362274
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/94 (81%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| |||||||| | ||||| || || |||| |||| || || || || ||||| ||||
Sbjct 2360471 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 2360529
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| ||||| ||||| |||||||| |||||||||||
Sbjct 2360530 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 2360563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592287976383720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |