Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq537 161 8e-35 >seq537 Length=2461945 Score = 161 bits (178), Expect = 8e-35 Identities = 134/164 (82%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| ||||| |||| ||||||||||||||| ||||| Sbjct 243277 AGGCCTGTGATGTGCGCGATCATGTAGGTGAGCAGAGCGTAGCTGGCGATGTTGAAGGGC 243336 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || ||||||||||||||||||||||| |||||||| || ||||| |||| | Sbjct 243337 ACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 243396 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| || | || ||||||||||| || ||||| || Sbjct 243397 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 243440 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 30158 TGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 30217 |||| ||||| || |||||||||||||| || || || || || || | || || |||| Sbjct 245827 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 245886 Query 30218 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 30277 | |||| ||| ||| ||||||| ||||||| || || ||||| |||||||| | Sbjct 245887 CTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTT 245946 Query 30278 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 | || ||||| || || || |||| |||||| || || Sbjct 245947 TCACTCCCTTGGAAGACAGTTCCTTGGCGTTTGTAGATCC 245986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408598212754889