Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq2141 86.0 2e-12 >seq2141 Length=56954 Score = 86.0 bits (94), Expect = 2e-12 Identities = 189/279 (68%), Gaps = 16/279 (6%) Strand=Plus/Minus Query 958 TTCCATATGGATGTTATGGTAGAATAG---CTCCTAGGTCCGGATTAGCGGCTAAGTTTA 1014 |||| | ||| || ||||| ||| ||| |||| | || || || || || || Sbjct 38885 TTCCTTCTGGGTGCTATGGAAGAGTAGTAGCTCCCCGTTCTGGCTTGGCTGCAAAACACT 38826 Query 1015 TGATTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTT 1074 | || ||| | || ||||| || || ||| ||||| || || || || ||||| || Sbjct 38825 TCATCGATATAGGAGCTGGCGTCATAGATGAAGACTACAGAGGAAATGTGGGTGTCGTAC 38766 Query 1075 TATTTAATTTTAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAA 1134 ||||||||||| || | || ||||| | || || ||| ||||||| ||| | | Sbjct 38765 TATTTAATTTTGGCAAAGAGAAGTTTCAAGTCAAAAAGGGCGATCGGATTGCACAGCTCA 38706 Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGATT 1188 |||||||| | | |||| ||||| |||||| ||| ||| ||||| || Sbjct 38705 TTTGTGAA----CGGATTTTTTATCCA--GAAATAGAGGAAGTTCAGGTTTTAGATGACA 38652 Query 1189 CGGAAAGGGGTTCTGCAGGATTTGGGTCTAC-CGGAAGA 1226 | ||||||||||| | ||| ||||| || || |||||| Sbjct 38651 CTGAAAGGGGTTCAGGAGGTTTTGGTTCCACGGGGAAGA 38613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138675188836308