Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq2141 86.0 2e-12
>seq2141
Length=56954
Score = 86.0 bits (94), Expect = 2e-12
Identities = 189/279 (68%), Gaps = 16/279 (6%)
Strand=Plus/Minus
Query 958 TTCCATATGGATGTTATGGTAGAATAG---CTCCTAGGTCCGGATTAGCGGCTAAGTTTA 1014
|||| | ||| || ||||| ||| ||| |||| | || || || || || ||
Sbjct 38885 TTCCTTCTGGGTGCTATGGAAGAGTAGTAGCTCCCCGTTCTGGCTTGGCTGCAAAACACT 38826
Query 1015 TGATTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTT 1074
| || ||| | || ||||| || || ||| ||||| || || || || ||||| ||
Sbjct 38825 TCATCGATATAGGAGCTGGCGTCATAGATGAAGACTACAGAGGAAATGTGGGTGTCGTAC 38766
Query 1075 TATTTAATTTTAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAA 1134
||||||||||| || | || ||||| | || || ||| ||||||| ||| | |
Sbjct 38765 TATTTAATTTTGGCAAAGAGAAGTTTCAAGTCAAAAAGGGCGATCGGATTGCACAGCTCA 38706
Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGATT 1188
|||||||| | | |||| ||||| |||||| ||| ||| ||||| ||
Sbjct 38705 TTTGTGAA----CGGATTTTTTATCCA--GAAATAGAGGAAGTTCAGGTTTTAGATGACA 38652
Query 1189 CGGAAAGGGGTTCTGCAGGATTTGGGTCTAC-CGGAAGA 1226
| ||||||||||| | ||| ||||| || || ||||||
Sbjct 38651 CTGAAAGGGGTTCAGGAGGTTTTGGTTCCACGGGGAAGA 38613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138675188836308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |