Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq33 107 1e-18
seq530 95.1 9e-15
seq314 93.3 3e-14
seq47 91.5 1e-13
seq85 89.7 4e-13
seq59 89.7 4e-13
seq395 86.0 5e-12
seq174 86.0 5e-12
seq2141 82.4 6e-11
>seq33
Length=6086033
Score = 107 bits (118), Expect = 1e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| ||||| ||||| | | | || | ||
Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||||||||||| ||| ||||| | |||| || ||||| ||
Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||||| |||||| ||| | | || | || ||||| | || || ||
Sbjct 2214903 CTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGT 2214962
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| | ||||| || |||||||||||| ||
Sbjct 2214963 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 2214999
>seq530
Length=2118653
Score = 95.1 bits (104), Expect = 9e-15
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| ||||| ||||| | | | || | ||
Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| ||| ||||| | | || || ||||| ||
Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|||||| |||||| | | | || || | || ||||| | || || ||
Sbjct 63920 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 63979
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| | ||||| || |||||||||||| ||
Sbjct 63980 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 64016
>seq314
Length=2398313
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| |||| || || | |||||| || || ||| |||||| || ||||| || || ||
Sbjct 2323421 GCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 2323480
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | || | || |||| ||| || || ||||| ||||| ||||| || || | ||
Sbjct 2323481 CAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGG 2323540
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||||||| || || ||| ||| | | || || | ||| ||
Sbjct 2323541 GATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGAC 2323600
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||| | || || || || ||||||| || || ||||| |||||||||
Sbjct 2323601 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 2323649
>seq47
Length=4803410
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| || || || |||| |||| || || ||| ||| || || || ||||| |||||
Sbjct 4289636 GCCCCCTCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 4289695
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
|| | || |||| |||| |||||| |||||||| |||| | ||| || || | |||
Sbjct 4289696 CAGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 4289755
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||||||| ||||| || ||| | | | || | ||||||
Sbjct 4289756 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 4289815
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || || || ||||| || || || || ||||||||
Sbjct 4289816 CTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289863
>seq85
Length=4131313
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| |||| || || | |||||| || || ||| |||||| || ||||| || || ||
Sbjct 1818183 GCCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 1818242
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | || | || |||| ||| || || ||||| ||||| ||||| || || | ||
Sbjct 1818243 CAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGG 1818302
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
| |||||||||||| || || ||| ||| | | || || | ||| ||
Sbjct 1818303 GATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGAC 1818362
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||| | || || || || || |||| || || ||||| |||||||||
Sbjct 1818363 CTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATC 1818411
>seq59
Length=2579055
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| ||||| ||||| | | | || | ||
Sbjct 1130466 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 1130525
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| ||| ||||| | |||| || ||||| ||
Sbjct 1130526 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1130585
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|||||| |||||| | | | || || || ||| | | || || ||
Sbjct 1130586 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGT 1130645
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| | ||||| || |||||||||||| ||
Sbjct 1130646 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 1130682
>seq395
Length=2662522
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| ||||| ||||| | | | || | ||
Sbjct 955178 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 955237
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || | || ||||||| ||| ||||| | |||| || || || |
Sbjct 955238 TTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATT 955297
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
|||||| |||||| | | | || || | || ||||| | ||||| ||
Sbjct 955298 ATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGT 955357
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||||| | ||||| || |||||||||||| ||
Sbjct 955358 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 955394
>seq174
Length=4297676
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || ||| ||| |||||||| |||| ||| | | | || | |||
Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTC 3533451
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || || || ||||||| ||| ||||| | |||| || ||||| ||
Sbjct 3533450 TTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 3533391
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | || | ||||| | || | ||| | || || ||
Sbjct 3533390 CTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGGT 3533331
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| ||| | | ||||| ||||||||||||||| ||
Sbjct 3533330 CTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTTG 3533294
>seq2141
Length=56954
Score = 82.4 bits (90), Expect = 6e-11
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126
|||||||| || |||||||||| | || ||||||| || ||||| || || |||
Sbjct 38684 GGATAAAAAATCCGTTCACAAATGAGCTGTGCAATCCGATCGCCCTTTTTGACTTGAAAC 38743
Query 9127 T-CTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGAT 9185
| || | | || ||| || || || || ||||| || || ||||| || ||||| ||
Sbjct 38744 TTCTCTTTGCCAAA-ATTAAATAGTACGACACCCACATTTCCTCTGTAGTCTTCATCTAT 38802
Query 9186 CACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGC 9239
|| ||||| || | ||||||||||| || | || | ||||| ||||| ||
Sbjct 38803 GACGCCAGCTCCTATATCGATGAAGTGTTTTGCAGCCAAGCCAGAACGGGGAGC 38856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380919526058439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |