Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq92 170 4e-37
seq1020 159 6e-34
seq218 141 2e-28
seq417 138 2e-27
seq3 91.5 3e-13
>seq92
Length=3695878
Score = 170 bits (188), Expect = 4e-37
Identities = 186/245 (76%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 241385 AGCTGCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCT 241442
||| |||| ||||| | || ||||| | || ||||| ||||||||| ||||||||||
Sbjct 2312493 AGCAGCTGGCAGCCGTTGCTGACATGGGTCAT--GACCTTCTGTTTGAGCTGGGCCACCT 2312436
Query 241443 GGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCA 241502
| ||||| || | || || | ||||| || ||||| || | |||||| |||||
Sbjct 2312435 GCTCCCGGAGGAGCCCAGCAGTGCTCGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCA 2312376
Query 241503 CTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCA 241562
| || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| ||||
Sbjct 2312375 CCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCA 2312316
Query 241563 AGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCG 241622
|||||||| || | ||| || ||| | |||||||| |||||||| ||||| | ||| |
Sbjct 2312315 GCCGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATATTGATGG 2312256
Query 241623 GAGAC 241627
| |||
Sbjct 2312255 GGGAC 2312251
>seq1020
Length=850931
Score = 159 bits (176), Expect = 6e-34
Identities = 484/737 (66%), Gaps = 22/737 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || ||||| ||||||||| || |||||||| |||| || || |||||
Sbjct 339045 CTGATATTCGCCTACTCTCTTCTCAAAG---TTAGTCTTCCCTTCCAGTGAAATATTCTC 338989
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTGTCAGGCCCATCTGTTCCAGCA 47957
||| ||| || || || | | | | | | || || || || | |||||||
Sbjct 338988 CATAAAGTCAAATGGATTT--TCTACTCTGAAAACCTTGCCAAAACCTA--GCTCCAGCA 338933
Query 47958 G--GT-GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
|| | || || ||| |||| || || | ||| | ||| ||||| || ||||
Sbjct 338932 TAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAATGA 338873
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| ||| ||||| |||| ||||| ||||||| ||||||| | ||||| | | |
Sbjct 338872 GCTTCACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCATTAATAATTA 338813
Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
| | ||| || | ||| || ||||||| | |||||| ||| | | || |||||
Sbjct 338812 TTTCCTTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGA---ACATCAGGCAGG 338756
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
||||||| | ||| || || || || | ||| | || | ||||| ||| ||| ||||
Sbjct 338755 CAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCCAG 338696
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | | ||||||||||| || | || ||||| ||||| |||| ||| |
Sbjct 338695 GCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGATTC 338636
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT-CTGAGATC 48313
| ||||| || || || || | || || ||| | | | | | |||| | || |
Sbjct 338635 CTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGTCC 338576
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
| | ||| ||||| |||||||||||||| | || ||||| ||||| ||||| ||||
Sbjct 338575 AATGCAAG-GCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAAG 338517
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATC 48430
|| | | || | || || ||| || |||||| || | |||||||
Sbjct 338516 AGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACT---GTACATC 338460
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
||||| || | || || || || | ||||| | ||||| | ||| || | |
Sbjct 338459 TCAGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATC 338400
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| |||||| | || | ||||| || || ||||| || || ||||| || |||
Sbjct 338399 TGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCA 338340
Query 48551 AAGAAGGCAAGGACATG 48567
||||| || || || ||
Sbjct 338339 AAGAAAGCCAGAACGTG 338323
>seq218
Length=3215786
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 1624409 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCTGTGGACGCCAGC 1624468
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 1624469 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 1624528
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| || | ||| || | |||||| || || | ||| || ||||||||
Sbjct 1624529 TTGCGCTTGCGGCACTTAGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 1624588
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 1624589 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 1624621
>seq417
Length=2207251
Score = 138 bits (152), Expect = 2e-27
Identities = 360/541 (67%), Gaps = 11/541 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || ||||| ||| |||||||||| |||||||| |||| || || |||||
Sbjct 863679 CTGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 863738
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||| || || || || | | | | || || || || | |||||||
Sbjct 863739 CATATAGTCAAATGGATTTTCTAC-TCCGAAAACCTTGCCAAAACCTA--GCTCCAGCAT 863795
Query 47959 --GT-GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
|| | || || ||| |||| || || | ||| | || ||||| || ||||
Sbjct 863796 AAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAACATGCAATTCATCCCAATGAA 863855
Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
|| |||||| |||| ||| || ||| ||||||||| ||||| | | ||
Sbjct 863856 CTTCATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCATTAATAATTAT 863915
Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
| ||| || | ||| || ||||||| | |||||| ||| | | || ||||||
Sbjct 863916 TTCCTTCACTCCCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGA---ACATCAGGCAGGC 863972
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
|||||| | ||| || || || || | ||| || || | ||||| || ||| |||||
Sbjct 863973 AAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGG 864032
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||| | | | | ||||||||||| || | | | ||||| ||||| |||||||| ||
Sbjct 864033 CATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAGATTCC 864092
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC- 48314
||||| || || || | | || || ||| | | ||| | ||||| |||||
Sbjct 864093 TTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCGATCCA 864152
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374
| | ||| |||||| |||||| |||||| | || ||||| ||||| ||||| |||||
Sbjct 864153 ACGCAAG-GCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTGAAGA 864211
Query 48375 G 48375
|
Sbjct 864212 G 864212
>seq3
Length=9835568
Score = 91.5 bits (100), Expect = 3e-13
Identities = 96/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|| ||||| | || || |||||||||||||||||| ||| || ||||||||||| |||
Sbjct 160802 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGG 160861
Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| || || | || ||||| |||||||||||||| |||| || |||||| |||
Sbjct 160862 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 160920
Query 213647 GGAC 213650
|||
Sbjct 160921 AGAC 160924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931487469285120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |