Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1020 127 4e-24 seq417 118 2e-21 >seq1020 Length=850931 Score = 127 bits (140), Expect = 4e-24 Identities = 397/602 (66%), Gaps = 21/602 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||| ||| ||||| ||| | || ||||| || ||| || | ||| Sbjct 338203 GATATTTGGCAGAGGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAAAGGTGGAT 338262 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCTCA 25591 || |||||||||| | |||| | | || | || || ||| | || | || Sbjct 338263 CTTTCCAAGGACATTCAGCACTGGGAATCCCTGAAGCCTGAGGAGAGATACTTTATATCC 338322 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| |||| ||||||||||| |||||| || || || || || || ||| Sbjct 338323 C--ACGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATCGTAAATGAAAACTTGGTGGAGC 338380 Query 25652 GATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | || | | ||||| ||| ||| || ||| |||||||| | ||||| | || Sbjct 338381 GGTTTAGCCAAGAAGTTCAGATTACA--GAAGCCCGCTGTTTCTATGACTTCCAATTTGC 338438 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGA-TGACG--TACATTACAGA 25766 ||| ||||| | || |||||| |||| || || || | |||| || |||| ||| Sbjct 338439 CATGGAAAACATCCATTCTGAGATGTA---CAGTCTCCTCACTGACACTTATATTAAAGA 338495 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | || || || || || ||||||||| || || | | |||| ||| Sbjct 338496 TTCCAAAGAAAGGGAATTTCTCTTCAACGCCATCGAGACAATGCCTTGTGTAAAGAAGAA 338555 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGC-TACGTTTGGCGAGCGGCTGG 25885 ||| |||||| || | |||| | | || || | ||| | || || ||| | | Sbjct 338556 GGCAGATTGGGCCTTGCATTGGA-CTGGGGACAAAGAGGGTACCTACGGGGAACGGGTTG 338614 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || |||||||||||||| || ||| | || ||||| ||||| | || ||||||| Sbjct 338615 TGGCTTTTGCTGCTGTGGAAGGAATCCTCTTTTCTGGTTCTTTTGCATCGATATTCTGGC 338674 Query 25946 TCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 ||||| | | | || | ||||| || || ||||||||| || || | ||||| || Sbjct 338675 TCAAG-AAACGTGGCCTGATGCCTGGCCTCGCCTTTTCCAATGAACTTACTAGCAGAGAT 338733 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 |||||| | ||| | || |||||||||||| | | || ||| || ||||||||||| Sbjct 338734 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCA---AACACCTGGTCCACAAACCT 338790 Query 26065 TC 26066 || Sbjct 338791 TC 338792 >seq417 Length=2207251 Score = 118 bits (130), Expect = 2e-21 Identities = 263/387 (68%), Gaps = 17/387 (4%) Strand=Plus/Minus Query 25687 TGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTT 25746 |||||||| || ||||| || |||| ||||| | || |||||| ||||| | || Sbjct 864311 TGTTTCTATGGCTTCCAAATTACCATGGAAAACATTCATTCTGAGATGTAT---AGTCTC 864255 Query 25747 CTGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAG 25803 || || || ||||||| ||| || || || || || || ||||| ||| Sbjct 864254 CTCATTGACACTTACATTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAACGCCATGGAG 864195 Query 25804 CACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCA---ACAGCCAG 25860 || || | | |||| | |||| |||||| || |||||| ||| || Sbjct 864194 ACAATGCCTTGTGTAAAGAAGGAGGCAGCCTGGGCCTTGCGTTGGATCGGGGACAA--AG 864137 Query 25861 AGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920 || ||||| | || || ||| | || | ||||||||||||||| || ||||| || Sbjct 864136 AG-GCTACCTACGGGGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCT 864078 Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTT 25979 ||||| |||| | | || |||||||||||| | | | | | ||||| || || || Sbjct 864077 GGTTCTTTTGAGTCGATATTCTGGCTCAAG-AAACGCAGCCTGATGCCTGGCCTCACGTT 864019 Query 25980 TTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 |||||| || || || ||||| || |||||| | ||| | || |||||||||||| | | Sbjct 864018 TTCCAATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT 863959 Query 26040 CACGGGCCACTTGCTCCACAAACCTTC 26066 || ||| || ||||||||||||| Sbjct 863958 CA---AACACCTGGTCCACAAACCTTC 863935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928799600089920