Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq58 307 1e-78
seq2 194 2e-44
seq3025 107 2e-18
>seq58
Length=5701780
Score = 307 bits (340), Expect = 1e-78
Identities = 665/986 (67%), Gaps = 13/986 (1%)
Strand=Plus/Plus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
|||||| || |||| ||| |||| ||| || | ||||| ||| ||| || || || ||
Sbjct 3157016 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCCGTGTCAAACTTGTTGGC 3157075
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| || | || ||||||| || ||| || | ||||||||||| ||
Sbjct 3157076 AAACAAGTGGTGC---TTGCGGAGCATCCAGTTCAAGTCCCCTGCTCCGAACACGCACAC 3157132
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
||||| | || || || |||| || ||||| | || || || | || || || ||
Sbjct 3157133 AGAACGCACATGGACCCCACTGCAGGGTGGGTAGGGGGCACCCTTGGAAACATCCCCCTC 3157192
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
| |||||||||| || |||||||| || || || |||||||| || |||| || || |
Sbjct 3157193 GAAGTACTGCCATTTGACAAACCTTGCAATTGCATGCATGTCAGACATGTCATACTTCTG 3157252
Query 160292 -CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTT 160350
| | ||| || | |||||| | ||| || | ||| | |||||||| || | |
Sbjct 3157253 GCTTAAGGACAATGAGCCCGGGACATCAGGG-ATCCTCTGAATAGTGGCCCAGAGATACT 3157311
Query 160351 CGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCA 160410
| || |||||||| || || |||| ||| ||||| |||| | |||| | | |
Sbjct 3157312 CATCTGGGCTGTATGTATCTTTAGCCCACTCCATAAACTTTTGGATTTTTTCATTCTCTA 3157371
Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470
| || | || || || | || ||||| || || ||||| || || | |||
Sbjct 3157372 GCACATACCCCACATACATCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGGGGTG 3157431
Query 160471 TGGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGC 160529
| | ||| || ||| ||| ||| || ||||| | || | || || || |
Sbjct 3157432 TTTCGAGAGGAGG-GTGCATTTTGTCAGTCCCTGTGTTCGTCAGCTTCCCATTAACAACT 3157490
Query 160530 GCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTG 160589
| | |||| |||||||| | | || | | |||||| | || || ||||| ||
Sbjct 3157491 GTATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCTCAGTTTCTAGGTTG 3157550
Query 160590 TTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAG 160649
|| |||| ||||| || |||| | ||| || || | ||| || || | |||||
Sbjct 3157551 TTTTCACCCATTAGCGACTTGAGCTTCCGGACAATTTCCAAGTTGGTTTTAATGGGAAAA 3157610
Query 160650 TCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTC 160709
|| ||||||| | ||||||| ||||||||| | || |||| || ||||| |
Sbjct 3157611 TCCATACCGCAAAGATTTATCAAGTACTTCCAGTCTGCACTCATCCTGTAGAGGTCTTGC 3157670
Query 160710 ATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTA 160769
||||| || | || ||||| || || ||||| || || ||||| || |||| || | |
Sbjct 3157671 ATGCAGTTGAGGTCGGCCTGAACCCGACTCCACGAGGCATACACCACACTCTCCAGCTGA 3157730
Query 160770 CTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAAC 160826
|||||||||||||| ||| ||| || || |||| || |||| | |||| |||| |
Sbjct 3157731 CTGGCCACAAAGACATTACTGAAGCAGGATGCGATGCCGATCACCGCGGCCAAAAAGGA- 3157789
Query 160827 ATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCC 160886
||| || | ||||| ||||||||| | ||| || | ||||||||| || |||||
Sbjct 3157790 ATC--CTCTGACTTTCTGTCCACGTGAATGCAGTAGAAATTCTGAGGCATATAAATGGCT 3157847
Query 160887 CTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGA 160946
|| || | ||| || | ||| || || || ||||| | ||| ||||| || ||||| |||
Sbjct 3157848 CTCAGGAGCCTGTCAAGCATTTCGATTTTGTGATGAACCACTATAGAATATGCTATGGGA 3157907
Query 160947 AACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAA 161006
|| || ||| || ||| |||| | | || | ||| ||||||| ||| ||
Sbjct 3157908 AATTCTTCCTCTTCTTTACTAAGGGGTTGCATGATATATCTACGCCTCTTGATGAAAGAA 3157967
Query 161007 TCACAATCCCGCGTCATGTTGATATA 161032
| |||||| | |||||||| |||||
Sbjct 3157968 TTACAATCTCTGGTCATGTTTATATA 3157993
>seq2
Length=17817800
Score = 194 bits (214), Expect = 2e-44
Identities = 231/312 (74%), Gaps = 6/312 (2%)
Strand=Plus/Plus
Query 168161 GCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCC 168220
||| | | |||| || ||||| || || || || || |||||||||||| || | || ||
Sbjct 454756 GCAGGCTGTTCCCGAGATCTTCCCAGAACCAAAAGTATTGAAGAGGCACTTGTAACACCC 454815
Query 168221 TTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGT 168280
||| ||||||| |||||| ||||| || || | |||||||| ||| ||| ||| ||
Sbjct 454816 TTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTTGAGTTCCAGCTGGGT 454875
Query 168281 TATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGT 168340
||||| | ||||||||| ||| || || ||||| || ||||||| |||||||||
Sbjct 454876 GATGTTTATCTTGCCTTTATAAGCAGGCTGGACCACAACCCCATGGTTCTTGCTGAAGGT 454935
Query 168341 GGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTT 168400
| ||||||| || ||||| ||||| || |||||||| || || |||| | |||
Sbjct 454936 GACCATGTTTTCTGGGCTAACAGCCTTGATTTTCTGCCATGTCACAATCAAGA---CTTC 454992
Query 168401 ATCGG---TCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATC 168457
|||| | ||||| || ||||| | ||||| || ||||||||||||||| ||||
Sbjct 454993 CTCGGAATTTTGCAGAGAGCATCTTAAGGAAGCAGGCGTGTTCAGCAGTTCTTTTTCATT 455052
Query 168458 TTGAGTTACGAC 168469
||| || |||||
Sbjct 455053 TTGGGTCACGAC 455064
Score = 86.0 bits (94), Expect = 7e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 167931 ACCTCTCCGTTTCCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTT 167990
||| || | || || || |||| ||| || ||||| || || | || ||| || |||
Sbjct 452237 ACCACTTCCTTCCCCACCTGACGCTTGGGGTCTTTGACCTGGAGAACGCTCGTGACAGAC 452296
Query 167991 GTAGTTCCATTGCGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACC 168050
|| || |||||| | || || | | || ||||| ||||||||||| || | |||
Sbjct 452297 GTGGTCCCATTGGGGTGCAAGAGAACCTCAGTACTGTTTTCAATCCCTGACCCAGACACT 452356
Query 168051 TTCCAGAATATTACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTAAGC 168105
|||||| | || ||||| || || || || | |||||||| || ||||||| ||
Sbjct 452357 TTCCAGGAGATCACAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGATATTTAGGC 452411
>seq3025
Length=103863
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| || |||| |||| || |||| |||||| | ||||| || |||| | || |
Sbjct 83661 AGATACTTGGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 83720
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || || |||||||||| || || || || | ||| | ||||| | | |||
Sbjct 83721 GGAATATAATTCTCATAATTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCT 83780
Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411
| || | ||||| |||||||| |||||| || |||| ||||||||||||||||
Sbjct 83781 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAAGAA 83840
Query 176412 AAATAGAACTTACA 176425
| ||| || || ||
Sbjct 83841 AGATAAAATTTGCA 83854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577191111070680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |