Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq29 113 8e-20 seq395 107 3e-18 seq59 102 1e-16 seq33 102 1e-16 seq174 96.9 6e-15 seq314 91.5 3e-13 seq85 91.5 3e-13 seq786 87.8 3e-12 >seq29 Length=5782310 Score = 113 bits (124), Expect = 8e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||||| || || ||||| || | |||||| ||||||||||| |||||||| || Sbjct 156566 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 156507 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || |||| |||| |||| || ||||| || | ||||| || ||||| || Sbjct 156506 ATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGAT 156447 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || ||||| || ||||| || || || ||||| ||| Sbjct 156446 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTTA 156407 >seq395 Length=2662522 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 955182 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 955241 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || | || || | |||||| ||||||||||| ||||||||||||| || Sbjct 955242 AGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATTATGA 955301 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| |||| ||||| || ||||| || || || Sbjct 955302 ATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGTCTTC 955361 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || ||||| || Sbjct 955362 CCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393 >seq59 Length=2579055 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 1130470 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 1130529 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | |||||| ||||||||||| |||||||| ||||| || Sbjct 1130530 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 1130589 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || ||||| | ||||| || || || Sbjct 1130590 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGTCTTC 1130649 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || || ||||| Sbjct 1130650 CCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 >seq33 Length=6086033 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 2214787 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 2214846 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | |||||| ||||||||||| |||||||| ||||| || Sbjct 2214847 AGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 2214906 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | |||| |||| || ||| | || | ||||| || ||||| || || || Sbjct 2214907 ATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 2214966 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || || ||||| Sbjct 2214967 CCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq174 Length=4297676 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || || || || || | |||||| ||||||||||| |||||||| ||| Sbjct 3533452 TCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTA 3533393 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| |||| |||| | ||||| || || |||| || ||||| || Sbjct 3533392 TCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATG 3533333 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || | || ||||| ||||| || ||||| || Sbjct 3533332 GTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 3533295 >seq314 Length=2398313 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| |||| || | |||||| ||||||||||| || | || | | Sbjct 2323434 CGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCA 2323493 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||| || |||||||| | | ||| || ||||| || || || || || Sbjct 2323494 TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTG 2323553 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | ||| |||||| || | ||| || || || || || Sbjct 2323554 TCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATG 2323613 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| || ||||| Sbjct 2323614 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq85 Length=4131313 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| |||| || | |||||| ||||||||||| || | || | | Sbjct 1818196 CGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCA 1818255 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||||| || |||||||| | | ||| || ||||| || || || || || Sbjct 1818256 TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTG 1818315 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | ||| ||||| || | ||| || || || || || Sbjct 1818316 TCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATG 1818375 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || ||||| || ||||| Sbjct 1818376 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq786 Length=1074229 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || ||| || Sbjct 712531 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGGTCCATCTTCC 712590 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| ||| ||||||| ||||||||||| ||||||| ||||| || Sbjct 712591 AGTTGCTTGCCAGCAAAGATTGATCTCTGCTGATCAGGAGGAATTCCTTACTTATCGTGA 712650 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || | || |||| |||| || ||||| || | ||| | |||||||| || || || Sbjct 712651 ATCTCGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCTAGAGTGATGGTCTTT 712710 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCA 193359 | | || ||||| | || || |||| Sbjct 712711 TCCATAAGGGTTTTCATGAAAATCTGCA 712738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899610620567760