Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq29 113 8e-20
seq395 107 3e-18
seq59 102 1e-16
seq33 102 1e-16
seq174 96.9 6e-15
seq314 91.5 3e-13
seq85 91.5 3e-13
seq786 87.8 3e-12
>seq29
Length=5782310
Score = 113 bits (124), Expect = 8e-20
Identities = 121/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || ||||| || || ||||| || | |||||| ||||||||||| |||||||| ||
Sbjct 156566 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 156507
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
|| || || |||| |||| |||| || ||||| || | ||||| || ||||| ||
Sbjct 156506 ATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGAT 156447
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
|| || ||||| || ||||| || || || ||||| |||
Sbjct 156446 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTTA 156407
>seq395
Length=2662522
Score = 107 bits (118), Expect = 3e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 955182 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 955241
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || | || || | |||||| ||||||||||| ||||||||||||| ||
Sbjct 955242 AGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATTATGA 955301
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| |||| ||||| || ||||| || || ||
Sbjct 955302 ATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGTCTTC 955361
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||| ||
Sbjct 955362 CCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393
>seq59
Length=2579055
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 1130470 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 1130529
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || | |||||| ||||||||||| |||||||| ||||| ||
Sbjct 1130530 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 1130589
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || ||||| | ||||| || || ||
Sbjct 1130590 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGTCTTC 1130649
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| || || || |||||
Sbjct 1130650 CCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678
>seq33
Length=6086033
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 2214787 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 2214846
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || | |||||| ||||||||||| |||||||| ||||| ||
Sbjct 2214847 AGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 2214906
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| || | |||| |||| || ||| | || | ||||| || ||||| || || ||
Sbjct 2214907 ATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 2214966
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| || || || |||||
Sbjct 2214967 CCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995
>seq174
Length=4297676
Score = 96.9 bits (106), Expect = 6e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||| || || || || || | |||||| ||||||||||| |||||||| |||
Sbjct 3533452 TCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTA 3533393
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| |||| |||| | ||||| || || |||| || ||||| ||
Sbjct 3533392 TCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATG 3533333
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || | || ||||| ||||| || ||||| ||
Sbjct 3533332 GTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 3533295
>seq314
Length=2398313
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
||||| |||| |||| || | |||||| ||||||||||| || | || | |
Sbjct 2323434 CGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCA 2323493
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||||| || |||||||| | | ||| || ||||| || || || || ||
Sbjct 2323494 TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTG 2323553
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| ||| | ||| |||||| || | ||| || || || || ||
Sbjct 2323554 TCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATG 2323613
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| || |||||
Sbjct 2323614 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648
>seq85
Length=4131313
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
||||| |||| |||| || | |||||| ||||||||||| || | || | |
Sbjct 1818196 CGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCA 1818255
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||||| || |||||||| | | ||| || ||||| || || || || ||
Sbjct 1818256 TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTG 1818315
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| ||||||| ||| | ||| ||||| || | ||| || || || || ||
Sbjct 1818316 TCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATG 1818375
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || ||||| || |||||
Sbjct 1818376 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410
>seq786
Length=1074229
Score = 87.8 bits (96), Expect = 3e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || ||| ||
Sbjct 712531 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGGTCCATCTTCC 712590
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| ||| ||||||| ||||||||||| ||||||| ||||| ||
Sbjct 712591 AGTTGCTTGCCAGCAAAGATTGATCTCTGCTGATCAGGAGGAATTCCTTACTTATCGTGA 712650
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| | || |||| |||| || ||||| || | ||| | |||||||| || || ||
Sbjct 712651 ATCTCGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCTAGAGTGATGGTCTTT 712710
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCA 193359
| | || ||||| | || || ||||
Sbjct 712711 TCCATAAGGGTTTTCATGAAAATCTGCA 712738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899610620567760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |