Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 104 7e-17
>seq1020
Length=850931
Score = 104 bits (114), Expect = 7e-17
Identities = 373/566 (66%), Gaps = 38/566 (7%)
Strand=Plus/Plus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || ||||| || || || || |||||||||| |||||| ||| | | |
Sbjct 338176 TTTGTCATCTTCCCCATCGAGTACTGTGATATTTGGCAGAGGTATAAGAAAGCTGAGGCT 338235
Query 133136 TTATTTTGGACTTCAACTGAA---GTAGATTTATCCAAAGACC--CAGCCCACTGGGAAG 133190
| |||||||| | ||||| || ||| | ||||| ||| |||| ||||||||
Sbjct 338236 TCCTTTTGGAC---AGCTGAAAAGGTGGATCTTTCCAAGGACATTCAGC--ACTGGGAAT 338290
Query 133191 CCCTTA---CTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247
|||| | ||| ||| || | || || ||| | | | || | || || ||||| ||||
Sbjct 338291 CCCTGAAGCCTGAGGA-GAGATACTTTATATCCC-ACG-TTCTGGCTTTCTTTGCAGCGA 338347
Query 133248 GTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCG 133307
||||||| || || |||||| || | ||||||| ||||||||| | | |
Sbjct 338348 GTGATGGCATCGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAG 338407
Query 133308 AAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCA--CATA 133365
||||||| || |||| | || |||| |||||||| ||||||||| | | |
Sbjct 338408 AAGCCCGCTGTTTCTATGACTTCCAATTTGCCATGGAAAACATCCATTCTGAGATGTACA 338467
Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGC 133425
||| ||| | ||| ||||| || |||||| || | | | | || ||||||||
Sbjct 338468 GTCTCCTC--ACTGACACTTATATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGC 338525
Query 133426 CATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484
|| | | || | | |||||| | || ||||| | || ||||| | | |||| ||
Sbjct 338526 CA-TCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGACTGGGG 338584
Query 133485 ACAAGCGTGCGAGTTTTGCTAC-----TCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAt 133539
|||| ||| | |||| || | || |||||||||| || || || ||
Sbjct 338585 ACAA-----AGAGGGTACCTACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAAGGAAT 338639
Query 133540 --ttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACC 133596
| ||||| |||| | || ||| || || || ||||| || || ||||| | | ||
Sbjct 338640 CCTCTTTTC--TGGTTC-TTTTGCATCGATATTCTGGCTCAAGAAACGTGGCCTGATGCC 338696
Query 133597 TGGACTGTGTTTTTCTAACGAACTTA 133622
||| || ||||| || |||||||
Sbjct 338697 TGGCCTCGCCTTTTCCAATGAACTTA 338722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471744187117941
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |