Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1020 104 7e-17 >seq1020 Length=850931 Score = 104 bits (114), Expect = 7e-17 Identities = 373/566 (66%), Gaps = 38/566 (7%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| || || || || |||||||||| |||||| ||| | | | Sbjct 338176 TTTGTCATCTTCCCCATCGAGTACTGTGATATTTGGCAGAGGTATAAGAAAGCTGAGGCT 338235 Query 133136 TTATTTTGGACTTCAACTGAA---GTAGATTTATCCAAAGACC--CAGCCCACTGGGAAG 133190 | |||||||| | ||||| || ||| | ||||| ||| |||| |||||||| Sbjct 338236 TCCTTTTGGAC---AGCTGAAAAGGTGGATCTTTCCAAGGACATTCAGC--ACTGGGAAT 338290 Query 133191 CCCTTA---CTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247 |||| | ||| ||| || | || || ||| | | | || | || || ||||| |||| Sbjct 338291 CCCTGAAGCCTGAGGA-GAGATACTTTATATCCC-ACG-TTCTGGCTTTCTTTGCAGCGA 338347 Query 133248 GTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCG 133307 ||||||| || || |||||| || | ||||||| ||||||||| | | | Sbjct 338348 GTGATGGCATCGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACAG 338407 Query 133308 AAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCA--CATA 133365 ||||||| || |||| | || |||| |||||||| ||||||||| | | | Sbjct 338408 AAGCCCGCTGTTTCTATGACTTCCAATTTGCCATGGAAAACATCCATTCTGAGATGTACA 338467 Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGC 133425 ||| ||| | ||| ||||| || |||||| || | | | | || |||||||| Sbjct 338468 GTCTCCTC--ACTGACACTTATATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGC 338525 Query 133426 CATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484 || | | || | | |||||| | || ||||| | || ||||| | | |||| || Sbjct 338526 CA-TCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGACTGGGG 338584 Query 133485 ACAAGCGTGCGAGTTTTGCTAC-----TCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAt 133539 |||| ||| | |||| || | || |||||||||| || || || || Sbjct 338585 ACAA-----AGAGGGTACCTACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAAGGAAT 338639 Query 133540 --ttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACC 133596 | ||||| |||| | || ||| || || || ||||| || || ||||| | | || Sbjct 338640 CCTCTTTTC--TGGTTC-TTTTGCATCGATATTCTGGCTCAAGAAACGTGGCCTGATGCC 338696 Query 133597 TGGACTGTGTTTTTCTAACGAACTTA 133622 ||| || ||||| || ||||||| Sbjct 338697 TGGCCTCGCCTTTTCCAATGAACTTA 338722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471744187117941