Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq33 127 2e-24
seq395 123 2e-23
seq530 122 7e-23
seq59 122 7e-23
seq29 120 2e-22
seq47 116 3e-21
seq949 113 3e-20
seq75 109 4e-19
seq1198 104 2e-17
seq476 96.9 3e-15
seq119 93.3 3e-14
seq1835 89.7 4e-13
seq786 87.8 1e-12
>seq33
Length=6086033
Score = 127 bits (140), Expect = 2e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | ||||| |||
Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| |||||| ||| |||||||| || ||||| || || || ||
Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| |||| || ||| |||| | || | || |||| || || ||||| || |
Sbjct 2214903 CTG-AATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGG 2214961
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || | |||||| || || ||||||||
Sbjct 2214962 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995
>seq395
Length=2662522
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | ||||| |||
Sbjct 955178 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 955237
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||| | |||| ||| |||||||| || ||||| || ||||| |
Sbjct 955238 TTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATT 955297
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| || | || ||| |||||| || || ||| |||| || || ||||| || |
Sbjct 955298 ATG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGG 955356
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
| || || || | |||||| || || |||||||| ||
Sbjct 955357 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393
>seq530
Length=2118653
Score = 122 bits (134), Expect = 7e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | ||||| |||
Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| ||| |||||||| || | ||| || || || ||
Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| || | || ||| |||||| || || || |||| || || ||||| || |
Sbjct 63920 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGG 63978
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || | |||||| || || ||||||||
Sbjct 63979 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012
>seq59
Length=2579055
Score = 122 bits (134), Expect = 7e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | ||||| |||
Sbjct 1130466 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 1130525
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| ||| |||||||| || ||||| || || || ||
Sbjct 1130526 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1130585
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| || | || ||| |||||| || || || |||| || | ||||| || |
Sbjct 1130586 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGG 1130644
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || | |||||| || || ||||||||
Sbjct 1130645 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678
>seq29
Length=5782310
Score = 120 bits (132), Expect = 2e-22
Identities = 161/219 (74%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAAT 29632
|| ||| | |||||| |||||||| ||||||||||| || || | |||| ||| | ||
Sbjct 156623 CAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAT-GTGTGTCCAT 156565
Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692
| || | ||| ||||||||| | |||| ||| |||||||| || ||||| || || || |
Sbjct 156564 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTAT 156505
Query 29693 CTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| ||| || | || ||| |||||| || || || ||| || || ||||| ||
Sbjct 156504 TCTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGATG 156446
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790
|| || || || | |||||| || || |||||||| |||
Sbjct 156445 GTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTTA 156407
>seq47
Length=4803410
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 4289409 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289468
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || || || ||||| || ||| | ||||| || ||||| || || ||
Sbjct 4289469 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289528
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | || |||||| | || | |||||| | || ||
Sbjct 4289529 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 4289588
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || ||||| || ||||| || || || ||||||||
Sbjct 4289589 TCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289635
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||||| |||| || || ||||| || || || ||||| || || |
Sbjct 4289865 CCCCCCCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289924
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || || || || || || ||| | ||||| || ||||| || || ||
Sbjct 4289925 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289984
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || |||||| | || | |||||| | || ||
Sbjct 4289985 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 4290044
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || || || || || ||||| || ||||| |||||||||
Sbjct 4290045 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATT 4290092
>seq949
Length=596474
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || |||| || || || || ||||| || ||||| ||||| | |
Sbjct 262154 CCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 262213
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || || || ||||||||| | || | || ||||| || || ||
Sbjct 262214 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 262273
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| |||||||| ||||| | || || ||| |||| | |||||| | || ||
Sbjct 262274 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 262333
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || || || ||||| || | ||| || ||||| |||||||||||
Sbjct 262334 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 262383
>seq75
Length=4930459
Score = 109 bits (120), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636
||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| |
Sbjct 2283668 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTCC 2283727
Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696
||||| ||||||||| | ||||| || ||||||| || ||||| || || || || ||
Sbjct 2283728 CAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGGAATTCCTTCCTTATCCTG 2283787
Query 29697 TAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755
||| || | || ||| |||||| || || || |||| | | ||||| || || |
Sbjct 2283788 -AATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGCCTTGAGAGTGATGGTCT 2283846
Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
| || || | |||||| || || |||||||| ||
Sbjct 2283847 TCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 2283880
>seq1198
Length=804178
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||| ||||| |||| || || || || ||||| || ||||||||||| | |
Sbjct 573711 CCACCCCTCAGGCGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 573652
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || || || ||||| ||| | || | || ||||| || || ||
Sbjct 573651 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 573592
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| |||| ||| ||||| | || || ||| |||| | |||||| | |||||
Sbjct 573591 ATGCCCTGTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACC 573532
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || | || || ||||| || | ||| || || || |||||||||||
Sbjct 573531 TCTAGGTTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 573482
>seq476
Length=3007960
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || | | | || || |||
Sbjct 1868602 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATC 1868661
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
| ||||| ||||| ||| | |||| || || ||||| | ||||| | || || ||
Sbjct 1868662 TCCCAGTTGCTTGCCGGCAAAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATC 1868721
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || | || |||| || |||||||| |||||
Sbjct 1868722 CTGAATCTTGACCTTTACATTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGT 1868781
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| | |||||| || || |||||||| ||
Sbjct 1868782 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 1868817
>seq119
Length=3329678
Score = 93.3 bits (102), Expect = 3e-14
Identities = 153/217 (71%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | ||| | | ||
Sbjct 528031 CAACACGAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTGTGTGCCTC 527976
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| || || ||||||||| | |||| || |||||||| || | ||| || || || ||
Sbjct 527975 TTCCAGGTGCTTGCCAGCAAAGATCAGTC--TGCTGATCAGGAGAAATTCCTTCCTTATC 527918
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| || | || ||| |||||| || || || ||||| || | ||| | || |
Sbjct 527917 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGAGTTCAACCCCGAGAATGATGG 527859
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
| || || | | |||||| || || |||||||| ||
Sbjct 527858 TCTTCCCCCTAAGGGTTTTCACGAAAATCTGCATCTT 527822
>seq1835
Length=364085
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| |||| ||||| | || ||||| || || | ||||| || | |
Sbjct 341220 CCTCCCCTCAAGTGCAGGACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTAGGCAGAC 341279
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| | || ||| | | ||| | ||||| || ||||| || || ||
Sbjct 341280 AGGGTGCGCCCATCTGCCAGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 341339
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || |||||||| || | || |||||| | || | |||||| | || ||
Sbjct 341340 ATGCCATCTTTGTCCTGGATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 341399
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || ||||| ||||| || || || ||||||||
Sbjct 341400 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 341446
>seq786
Length=1074229
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | || | |||
Sbjct 712527 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGGTCCATC 712586
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | || |||| |||||||| || ||||| || | || ||
Sbjct 712587 TTCCAGTTGCTTGCCAGCAAAGATTGATCTCTGCTGATCAGGAGGAATTCCTTACTTATC 712646
Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
|| ||| | | || ||| |||||| || || || |||| | || ||||| || |
Sbjct 712647 GTG-AATCTCGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCTAGAGTGATGG 712705
Query 29753 T-TTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785
| ||| ||| | | |||||| | || |||||||
Sbjct 712706 TCTTTTCCA-TAAGGGTTTTCATGAAAATCTGCA 712738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385200922913913
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |