Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq33 127 2e-24 seq395 123 2e-23 seq530 122 7e-23 seq59 122 7e-23 seq29 120 2e-22 seq47 116 3e-21 seq949 113 3e-20 seq75 109 4e-19 seq1198 104 2e-17 seq476 96.9 3e-15 seq119 93.3 3e-14 seq1835 89.7 4e-13 seq786 87.8 1e-12 >seq33 Length=6086033 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| |||||| ||| |||||||| || ||||| || || || || Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| |||| || ||| |||| | || | || |||| || || ||||| || | Sbjct 2214903 CTG-AATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGG 2214961 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || | |||||| || || |||||||| Sbjct 2214962 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq395 Length=2662522 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| Sbjct 955178 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 955237 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||| | |||| ||| |||||||| || ||||| || ||||| | Sbjct 955238 TTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATT 955297 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| || | || ||| |||||| || || ||| |||| || || ||||| || | Sbjct 955298 ATG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGG 955356 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || || | |||||| || || |||||||| || Sbjct 955357 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393 >seq530 Length=2118653 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||| |||||||| || | ||| || || || || Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| || | || ||| |||||| || || || |||| || || ||||| || | Sbjct 63920 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGG 63978 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || | |||||| || || |||||||| Sbjct 63979 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012 >seq59 Length=2579055 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| Sbjct 1130466 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 1130525 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||| |||||||| || ||||| || || || || Sbjct 1130526 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1130585 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| || | || ||| |||||| || || || |||| || | ||||| || | Sbjct 1130586 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGG 1130644 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || | |||||| || || |||||||| Sbjct 1130645 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 >seq29 Length=5782310 Score = 120 bits (132), Expect = 2e-22 Identities = 161/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAAT 29632 || ||| | |||||| |||||||| ||||||||||| || || | |||| ||| | || Sbjct 156623 CAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAT-GTGTGTCCAT 156565 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || | ||| ||||||||| | |||| ||| |||||||| || ||||| || || || | Sbjct 156564 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTAT 156505 Query 29693 CTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || ||| || | || ||| |||||| || || || ||| || || ||||| || Sbjct 156504 TCTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGATG 156446 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || || || || | |||||| || || |||||||| ||| Sbjct 156445 GTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTTA 156407 >seq47 Length=4803410 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| |||| || || ||||| || || || ||||| || || | Sbjct 4289409 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289468 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || ||||| || ||| | ||||| || ||||| || || || Sbjct 4289469 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289528 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| | || | |||||| | || || Sbjct 4289529 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 4289588 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || ||||| || ||||| || || || |||||||| Sbjct 4289589 TCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289635 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||||| |||| || || ||||| || || || ||||| || || | Sbjct 4289865 CCCCCCCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289924 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || || || || || ||| | ||||| || ||||| || || || Sbjct 4289925 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289984 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || |||||| | || | |||||| | || || Sbjct 4289985 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 4290044 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || ||||| || ||||| ||||||||| Sbjct 4290045 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATT 4290092 >seq949 Length=596474 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| || |||| || || || || ||||| || ||||| ||||| | | Sbjct 262154 CCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 262213 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||||||| | || | || ||||| || || || Sbjct 262214 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 262273 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||| ||||| | || || ||| |||| | |||||| | || || Sbjct 262274 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 262333 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | ||| || ||||| ||||||||||| Sbjct 262334 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 262383 >seq75 Length=4930459 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| ||||| || ||||||||||| || || | | ||||| ||| | Sbjct 2283668 CACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTCC 2283727 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||||| ||||||||| | ||||| || ||||||| || ||||| || || || || || Sbjct 2283728 CAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGGAATTCCTTCCTTATCCTG 2283787 Query 29697 TAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 ||| || | || ||| |||||| || || || |||| | | ||||| || || | Sbjct 2283788 -AATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGCCTTGAGAGTGATGGTCT 2283846 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || | |||||| || || |||||||| || Sbjct 2283847 TCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 2283880 >seq1198 Length=804178 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| ||||| |||| || || || || ||||| || ||||||||||| | | Sbjct 573711 CCACCCCTCAGGCGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 573652 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || || || ||||| ||| | || | || ||||| || || || Sbjct 573651 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 573592 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||| ||| ||||| | || || ||| |||| | |||||| | ||||| Sbjct 573591 ATGCCCTGTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACC 573532 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | || || ||||| || | ||| || || || ||||||||||| Sbjct 573531 TCTAGGTTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 573482 >seq476 Length=3007960 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || | | | || || ||| Sbjct 1868602 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATC 1868661 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 | ||||| ||||| ||| | |||| || || ||||| | ||||| | || || || Sbjct 1868662 TCCCAGTTGCTTGCCGGCAAAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATC 1868721 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || | || |||| || |||||||| ||||| Sbjct 1868722 CTGAATCTTGACCTTTACATTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGT 1868781 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| | |||||| || || |||||||| || Sbjct 1868782 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 1868817 >seq119 Length=3329678 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | ||| | | || Sbjct 528031 CAACACGAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTGTGTGCCTC 527976 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||||||| | |||| || |||||||| || | ||| || || || || Sbjct 527975 TTCCAGGTGCTTGCCAGCAAAGATCAGTC--TGCTGATCAGGAGAAATTCCTTCCTTATC 527918 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| || | || ||| |||||| || || || ||||| || | ||| | || | Sbjct 527917 CTG-AATCTTGGCCTTTACATTTTCTATTGTATCCGAGAGTTCAACCCCGAGAATGATGG 527859 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || | | |||||| || || |||||||| || Sbjct 527858 TCTTCCCCCTAAGGGTTTTCACGAAAATCTGCATCTT 527822 >seq1835 Length=364085 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| |||| ||||| | || ||||| || || | ||||| || | | Sbjct 341220 CCTCCCCTCAAGTGCAGGACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTAGGCAGAC 341279 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| | || ||| | | ||| | ||||| || ||||| || || || Sbjct 341280 AGGGTGCGCCCATCTGCCAGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 341339 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||| || | || |||||| | || | |||||| | || || Sbjct 341340 ATGCCATCTTTGTCCTGGATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 341399 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| ||||| || || || |||||||| Sbjct 341400 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 341446 >seq786 Length=1074229 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||||| || || | | || | ||| Sbjct 712527 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGGTCCATC 712586 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | || |||| |||||||| || ||||| || | || || Sbjct 712587 TTCCAGTTGCTTGCCAGCAAAGATTGATCTCTGCTGATCAGGAGGAATTCCTTACTTATC 712646 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || ||| | | || ||| |||||| || || || |||| | || ||||| || | Sbjct 712647 GTG-AATCTCGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCTAGAGTGATGG 712705 Query 29753 T-TTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785 | ||| ||| | | |||||| | || ||||||| Sbjct 712706 TCTTTTCCA-TAAGGGTTTTCATGAAAATCTGCA 712738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385200922913913