Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq947 145 7e-30
seq53 132 4e-26
seq225 131 2e-25
seq148 84.2 2e-11
>seq947
Length=397798
Score = 145 bits (160), Expect = 7e-30
Identities = 700/1099 (64%), Gaps = 47/1099 (4%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| || || ||||| ||| | ||| |||| | |||||| | || |
Sbjct 196144 ATGCCTTCTATGTCGCCGACCTGGGAGACATTTTAAAGAAACATCTGAGATGGTTAAAAG 196203
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323
|| | ||| |||| || ||||| || || || | | || | || | | |
Sbjct 196204 CTCTTCCTCGGGTCACCCCCTTTTATGCAGTCAAATGCAATGATAGCAGAACCA-TAGTG 196262
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| ||| || || || || |||||||||||||| ||| ||||| |||||
Sbjct 196263 AAGACCCTTGCTACCATTGGGACAGGATTTGACTGTGCCAGCAAGACCGAGATACAGTTG 196322
Query 20384 CTGCAAAATCTGGGAGT-TCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCC 20442
| |||| ||| || || || | |||| ||||| | | ||| ||||||||||| ||
Sbjct 196323 GTACAAAGTCTTGGGGTGTCTC-CAGAGAGGATTATCTATGCAAATCCTTGTAAACAAGT 196381
Query 20443 TTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGA 20502
|| || || | ||| || || | | ||||| | |||||||||||||||||||||
Sbjct 196382 GTCTCAGATTAAGTACGCTGCCAATAACGGAGTCCAGATGATGACTTTTGATAGTGAAGT 196441
Query 20503 AGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGT 20562
|| | | ||| ||| | ||| | | || ||| |||| || |||||
Sbjct 196442 TGAATTGATGAAAGTTGCCAGGGCGCATCCAAAGGCAAAGTTGGTTTTGCGGATTGCCAC 196501
Query 20563 GGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAG 20622
||||| || || ||| ||| || ||||| || ||||| || | | || |||
Sbjct 196502 TGATGATTCCAAAGCAGTCAGTCGCCTCAGTGTTAAATTTGGTGCCACACTCAAAATCAG 196561
Query 20623 CCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCA 20682
| | || | || ||| | | | || | || || || || |||||||||||
Sbjct 196562 CAGGCTTCTTTTGGAATGGGCGAGAGAGCTAAATATTGATGTCATTGGTGTCAGCTTCCA 196621
Query 20683 CGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAG 20742
|||||| |||||||||| ||| | || | | ||||||| |||| ||| | |
Sbjct 196622 CGTGGGAAGTGGCTGCACGGATCCTGAGACCTTTGTGCAAGCCATCTCTGATGCCCGCTG 196681
Query 20743 AGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGC 20800
| |||||| | || ||||| | || || ||||||| || | |||| |||||
Sbjct 196682 TGTCTTTGACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTCATATCGGTGGT 196739
Query 20801 GGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATT 20857
|||||| || ||||| |||| || ||| | ||||| || || | || ||
Sbjct 196740 GGCTTT-CCTGGATC--TGAGGATGTAAAGCTTAAATTTGAAGAGATCACCAGTGTGATC 196796
Query 20858 AACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCT 20917
||| | ||| |||| | | | || || | || | || ||| || | || ||
Sbjct 196797 AACCCAGCCCTGGACAAGTACTTCCCGGCCGACTCGGGGGTGCAAATCATAGCGGAGCCC 196856
Query 20918 GGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GT 20975
||||| |||||| | |||| || | || | ||||| | | ||||| |||||
Sbjct 196857 GGCAGATACTACATTGCCTCAGCCTTCACGCTCGCTGTTAACATCATTGCCAAAAAACTC 196916
Query 20976 GTGTTGAAG--ACA-----CTCCTG------------------GAGATAAAAAGTTTATG 21010
|| || ||| ||| | ||| | || ||| ||||||
Sbjct 196917 GTATTAAAGGAACAGACAGGTTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATG 196976
Query 21011 TATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGT 21070
||||| || || ||||| || ||||| ||||| ||||| | | | | ||||| |
Sbjct 196977 TATTACGTGAACGATGGAGTGTATGGATCGTTTAATTGCATCCTCTATGATCATGCCCAC 197036
Query 21071 CCTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTCTAGCAT 21129
| ||| | |||| || ||| | || || | || ||||| | |||||
Sbjct 197037 GTGAAGCCCCTCCTGCAGAAGAGACCCAAACC-AGATGCGAAGTACTATTCAACCAGCAT 197095
Query 21130 TTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCT 21189
||||| || | || | ||| | ||| ||||||| |||| || || |||| ||| |
Sbjct 197096 ATGGGGACCAACATGTAACGGCCTGGATCGCATTGTCGAGCGCTGCGACTTGCCCGAGAT 197155
Query 21190 TCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAGCT-CT 21247
|| |||||||| || | | |||||||||||||| ||||||| | ||| | ||| ||
Sbjct 197156 GCACGTGGGCGATTGAATGGTTTTTGAAAACATGGGTGCTTACACGGTTG--CTGCTGCT 197213
Query 21248 TCAACCTTTAACGGCTTCC 21266
|| || || || || ||||
Sbjct 197214 TCTACTTTCAATGGGTTCC 197232
>seq53
Length=5910346
Score = 132 bits (146), Expect = 4e-26
Identities = 695/1097 (63%), Gaps = 43/1097 (4%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| | || || ||||| ||| | ||| |||| | |||||| | || |
Sbjct 685375 ATGCCTTCTATGTCACCGACCTGGGAGACATTTTAAAGAAACATCTGAGATGGTTAAAAG 685434
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323
|| | ||| |||| || ||||| || || || | | || | || | | |
Sbjct 685435 CTCTTCCTCGGGTCACCCCCTTTTATGCAGTCAAATGCAATGATAGCAGAACCA-TAGTG 685493
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| || || || || || |||||||||||||| ||| ||||| || ||
Sbjct 685494 AAGACCCTTGCCACCATTGGGACAGGATTTGACTGTGCCAGCAAGACCGAGATACAATTG 685553
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
| |||| ||| || || | |||| ||||| | ||| ||||||||||| ||
Sbjct 685554 GTACAAAGTCTTGGGGTGCCTCCAGAGAGGATTATCAATGCAAATCCTTGTAAACAAGTG 685613
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503
|| || || | ||| || || | | ||||| | |||||||||| ||||||||||
Sbjct 685614 TCTCAGATTAAGTACGCTGCCAACAATGGAGGCCAGATGATGACTTTCGATAGTGAAGTT 685673
Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563
|| | | | | ||| | ||| | | || ||| |||| || |||||
Sbjct 685674 GAATTGATGATAGTTGCCAGGGCGCATCCAAAGGCAAAGTTGGTTTTGCGGATTGCCACT 685733
Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623
||||| || || ||| | | || ||||| || ||||| | | | || |||
Sbjct 685734 GATGATTCCAAAGCAGTCTGTCGCCTCAGTGTTAAATTTGGTGTCACACTCAAAATGAGC 685793
Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683
| || | ||||| | | | | || | || || || || ||||||||||||
Sbjct 685794 AGGCTTCTTTTGGAACAGACGAGAGAGCTAAATATTGATGTCATTGGTGTCAGCTTCCAC 685853
Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743
||||| |||||| ||| ||| | || | | || ||||||| |||| ||| | |
Sbjct 685854 GTGGGAAGTGGCCGCACCGATCCTGAGACCTTCATGCAAGCCATCTCTGATGCCCGCTGT 685913
Query 20744 GCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801
| |||||| | || ||||| | || || ||||||| || | || |||||||| |
Sbjct 685914 GTCTTTGACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTGACATTGGTGGTG 685971
Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTA 20858
||||| || ||||| |||| || ||| | ||||| || || | || || |
Sbjct 685972 GCTTT-CCTGGATC--TGAGGATGTAAAGCTTAAATTTGAAGAGATCACCAGTGTGATCA 686028
Query 20859 ACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTG 20918
|| | ||| |||| | | | || |||| || | || ||| || | || || |
Sbjct 686029 ACCCAGCCCTGGACAAGTACTTCCCAGCCGACCCGGGGGTGCGAATCATAGCGGAGCCCG 686088
Query 20919 GCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GTG 20976
|||| ||||| | | |||| || | | | || || | | | ||||| ||||| ||
Sbjct 686089 GCAGATACTATGTTGCCTCAGCCTTTATGCTGGCAGTTAATATCATTGCCAAAAAACTTG 686148
Query 20977 TGTTGAAG--ACA------CTC-----CTGGAGAT------------AAAAAGTTTATGT 21011
| || ||| ||| ||| || |||| ||| |||||||
Sbjct 686149 TATTAAAGGAACAGACAGGCTCTGATGATGAAGATGAGTCGAGTGAACAAACCTTTATGT 686208
Query 21012 ATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTC 21071
|||| | || ||||| || ||||| ||||| ||||| | | | | ||||| |
Sbjct 686209 ATTACATGAACGATGGAGTGTATGGATCATTTAATTGCATCCTCTATGATCATGCCCACG 686268
Query 21072 CTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTCTAGCATT 21130
| ||| | |||| || ||| | || || || || ||||| | |||||
Sbjct 686269 TGAAGCCCCTTCTGCAGAAGAGACCCAAACC-AGATGAGAAGTACTATTCAACCAGCATA 686327
Query 21131 TGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAGCTT 21190
||||| || | || || ||| | ||| |||||| || | || || |||| ||| |
Sbjct 686328 TGGGGACCAACATGTGACGGCCTGGATCTCATTGTCCAGGGCTGCGACTTGCCTGAGATG 686387
Query 21191 CAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGCT-CTTC 21249
|| |||||||| ||| | | |||||||||||||| |||||| ||| | ||| ||||
Sbjct 686388 CATGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTAC-GCTGTTGCTGCTGCTTC 686446
Query 21250 AACCTTTAACGGCTTCC 21266
|| || || || ||||
Sbjct 686447 TACTTTCAATGGGTTCC 686463
>seq225
Length=4555982
Score = 131 bits (144), Expect = 2e-25
Identities = 398/608 (65%), Gaps = 8/608 (1%)
Strand=Plus/Minus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| || || ||||| ||| | ||| |||| | |||||| | || |
Sbjct 88501 ATGCCTTCTATGTCGCCGACCTGGGAGACATTTTAAAGAAACATCTGAGATGGTTAAAAG 88442
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323
|| | ||| |||| || ||||| || || || | | || | || | | |
Sbjct 88441 CTCTTCCTCGGGTCACCCCCTTTTATGCAGTCAAATGCAATGATAGCAGAACCA-TAGTG 88383
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
|||||||| ||| || || || || |||||||||||||| ||| ||||| |||||
Sbjct 88382 AAGACCCTTGCTACCATTGCGACAGGATTTGACTGTGCCAGCAAGACCGAGATACAGTTG 88323
Query 20384 CTGCAAAATCTGGGAGT-TCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCC 20442
| |||| ||| || || || | |||| ||||| | | ||| ||||||||||| ||
Sbjct 88322 GTACAAAGTCTTGGGGTGTCTC-CAGAGAGGATTATCTATGCAAATCCTTGTAAACAAGT 88264
Query 20443 TTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGA 20502
|| || || | ||| || || | | ||||| | ||||||||||||||| |||||
Sbjct 88263 GTCTCAGATTAAGTACGCTGCCAATAACGGAGTCCAGATGATGACTTTTGATAATGAAGT 88204
Query 20503 AGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGT 20562
|| | | ||| ||| | ||| | | || ||| |||| || |||||
Sbjct 88203 TGAATTGATGAAAGTTGCCAGGGCGCATCCAAAGGCAAAGTTGGTTTTGCGGATTGCCAC 88144
Query 20563 GGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAG 20622
||||| || || ||| | | || ||||| || ||||| || | | || |||
Sbjct 88143 CGATGATTCCAAAGCAGTCTGTCGCCTCAGTGTTAAATTTGGTGCCACACTCAAAATCAG 88084
Query 20623 CCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCA 20682
| | || | ||| ||| | | | || | || || || || |||||||||||
Sbjct 88083 CAGGCTTCTTTTGGAACGGGCGAGAGAGCTAAATATTGATGTCATTGGTGTCAGCTTCCA 88024
Query 20683 CGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAG 20742
|||||| |||||||||| ||| | || | | ||||||| |||| ||| | |
Sbjct 88023 CGTGGGAAGTGGCTGCACGGATCCTGAGACCTTTGTGCAAGCCATCTCTGATGCCCGCTG 87964
Query 20743 AGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGC 20800
| |||||| | || ||||| | || || ||||||| || | ||||| |||||
Sbjct 87963 TGTCTTTGACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTGATATCGGTGGT 87906
Query 20801 GGCTTTCC 20808
||||||||
Sbjct 87905 GGCTTTCC 87898
>seq148
Length=4816872
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184
||||| ||||| || | || || ||| | ||| ||||||| |||| || || ||||
Sbjct 2113049 AGCATATGGGGACCAACATGTGACGGCCTGGATCGCATTGTCGAGCGCTGCGACTTGCCC 2113108
Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGTCAG 21243
||| | || |||||||| ||| | | |||||||||||||| ||||||| | ||| | |
Sbjct 2113109 GAGATGCACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACACGGTTG--CTG 2113166
Query 21244 CT-CTTCAACCTTTAACGGCTTCC 21266
|| |||| || || || || ||||
Sbjct 2113167 CTGCTTCTACTTTCAATGGGTTCC 2113190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463523042712240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |