Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq47 107 2e-18 >seq47 Length=4803410 Score = 107 bits (118), Expect = 2e-18 Identities = 96/119 (81%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130 ||||||| |||||||| |||||||||| ||| ||| |||| || | | | ||||||| Sbjct 2199392 CCACAGCCCTAGCTTCAGGTCTGAAAA-GAGGAGGCTTCTTCTGGGGGCAACAGAAGGCA 2199450 Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT 1189 ||||||||||| | || |||||| ||||||| | |||||||| || ||||||| |||| Sbjct 2199451 TTTTAAAGAAATGACTCAGAAAAGAAATCTGTAGTGCACTTACGTAGTCTTCCAAAAGT 2199509 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 171 CACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTTCAAG 230 ||||| || |||||||| |||| |||||| |||| ||||||||||||||||||| | | Sbjct 2197405 CACAAAATCCAAAACAGATTATGAGAAAAGTTCAATATAATTTATTAAATAATTCCCGAA 2197464 Query 231 GGCTTCTTTAAGAAGCATTAA 251 |||| ||| ||| |||||||| Sbjct 2197465 GGCTGCTTAAAGGAGCATTAA 2197485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438538658574000