Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq47 107 2e-18
>seq47
Length=4803410
Score = 107 bits (118), Expect = 2e-18
Identities = 96/119 (81%), Gaps = 1/119 (1%)
Strand=Plus/Plus
Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130
||||||| |||||||| |||||||||| ||| ||| |||| || | | | |||||||
Sbjct 2199392 CCACAGCCCTAGCTTCAGGTCTGAAAA-GAGGAGGCTTCTTCTGGGGGCAACAGAAGGCA 2199450
Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT 1189
||||||||||| | || |||||| ||||||| | |||||||| || ||||||| ||||
Sbjct 2199451 TTTTAAAGAAATGACTCAGAAAAGAAATCTGTAGTGCACTTACGTAGTCTTCCAAAAGT 2199509
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 171 CACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTTCAAG 230
||||| || |||||||| |||| |||||| |||| ||||||||||||||||||| | |
Sbjct 2197405 CACAAAATCCAAAACAGATTATGAGAAAAGTTCAATATAATTTATTAAATAATTCCCGAA 2197464
Query 231 GGCTTCTTTAAGAAGCATTAA 251
|||| ||| ||| ||||||||
Sbjct 2197465 GGCTGCTTAAAGGAGCATTAA 2197485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438538658574000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |