Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq47 107 1e-18
seq1198 89.7 3e-13
seq314 89.7 3e-13
seq85 89.7 3e-13
seq1835 84.2 1e-11
seq949 84.2 1e-11
>seq47
Length=4803410
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| || |||||| ||| || || |||||||| || || || ||||| |||| |||
Sbjct 4289883 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289942
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || || |||||||| ||||| | |||||| || | || | || ||||||||
Sbjct 4289943 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 4290002
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| ||| || | ||| || | |||||| || | ||||| || | ||||| || ||
Sbjct 4290003 ATCTTCGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 4290061
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
||| || || || || |||||||||||||| ||
Sbjct 4290062 ACCGGTCAAGGTCTTCACAAAGATCTGCATTGT 4290094
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || ||||| || | |||| || |||||| ||| || || |||||||| || |
Sbjct 4289407 CACCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 4289466
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| |||| |||| ||||| |||||||| ||||| | |||||| || | |
Sbjct 4289467 ACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGG 4289526
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || ||||| || ||| || | ||| || | |||||| || | |||
Sbjct 4289527 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCC 4289585
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || || || || || || || || |||||||||||
Sbjct 4289586 ACCTCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289635
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | || | |||| || |||||| ||| || || |||||||| || ||
Sbjct 4289637 CCCCCTCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289696
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| |||| || || |||||||| ||||| | |||||| || | ||
Sbjct 4289697 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289756
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| || | ||| || | |||||| || | |||||
Sbjct 4289757 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCCAC 4289815
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || || || || || |||||||||||
Sbjct 4289816 CTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289863
>seq1198
Length=804178
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||||| ||| | |||| || ||||| |||||| || || |||||||| ||
Sbjct 573939 CCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAA 573880
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || ||||| || | | |||||| || | ||
Sbjct 573879 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 573820
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| || ||||| || || ||| |||| | | ||| |||||| || | |||||
Sbjct 573819 ATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGTTTTCAGTGGTGTCACTGGGCTCCAC 573761
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || |||| || || || |||||||||||
Sbjct 573760 CTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 573713
>seq314
Length=2398313
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || ||| |||||| || || || || || || || || || | || ||
Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| ||||| || |||||||||| ||||||||| || |||| | || || |||||
Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558
Query 33660 AATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||||| ||| | ||| ||| ||||| || | || || || | ||||| || |
Sbjct 2323559 GATTTTGGCTTTGA-CATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCT 2323617
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | || || ||||||||||||||
Sbjct 2323618 TGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648
>seq85
Length=4131313
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || ||| |||||| || || || || || || || || || | || ||
Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| ||||| || |||||||||| ||||||||| || |||| | || || |||||
Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320
Query 33660 AATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||||| ||| | ||| ||| | ||| || | || || || | ||||| || |
Sbjct 1818321 GATTTTGGCTTTGA-CATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCT 1818379
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| ||||| | || || ||||||||||||||
Sbjct 1818380 TGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410
>seq1835
Length=364085
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || ||||| | | ||||| | |||||| ||| || | |||||||| | |
Sbjct 341218 CACCTCCCCTCAAGTGCAGGACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTAGGCAG 341277
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || ||| ||| | | |||||| ||||| | |||||| || | |
Sbjct 341278 ACAGGGTGCGCCCATCTGCCAGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGG 341337
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || |||||||| || ||| || | ||| || | |||||| || | |||
Sbjct 341338 GGATGCCATCTTTGTCCTGGATCTTCACCTTGA-CATTCTCGATGGTGTCACTGGGCTCC 341396
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || ||||| || || || || || |||||||||||
Sbjct 341397 ACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 341446
>seq949
Length=596474
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | ||| | |||| || ||||| |||||| || ||||||||||| ||
Sbjct 262154 CCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 262213
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || ||||| || | | |||||| || | ||
Sbjct 262214 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 262273
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || ||||| || || || ||| |||| || | |||||| || | |||||
Sbjct 262274 ATGCCCTCTTTATCTTGGATCTTGGCCTTC-ACATTTTCGATGGTGTCACTGGGCTCCAC 262332
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || ||||||||||||||
Sbjct 262333 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 262380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328688404330560
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