Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq530 138 3e-27 seq59 132 1e-25 seq395 129 1e-24 seq33 129 1e-24 seq29 127 5e-24 seq949 113 1e-19 seq1114 102 2e-16 seq786 102 2e-16 seq1198 95.1 3e-14 seq34 95.1 3e-14 seq119 93.3 1e-13 >seq530 Length=2118653 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||| | || || ||| || || ||| | ||| Sbjct 63997 AAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 63938 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || || |||||||||| || || || ||||| ||||| Sbjct 63937 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAGCAGAGACTGATCTTT 63878 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 63877 GCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCC 63818 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 63817 ACTCTTCATCTTGTGTTGAGACTTCG 63792 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 63792 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 63851 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || ||||| || Sbjct 63852 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 63886 >seq59 Length=2579055 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||| | | || ||| | || || ||| | ||| Sbjct 1130663 AAAACCCTTACGGGGAAGACCATCACTCTCGCGGTTGAACGCTCGGATACAATAGAAAAT 1130604 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || || ||||||||| || || || ||||| ||||| Sbjct 1130603 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 1130544 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 1130543 GCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCC 1130484 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 1130483 ACTCTTCATCTTGTGTTGAGACTTCG 1130458 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 1130458 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 1130517 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || ||||| || Sbjct 1130518 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 1130552 >seq395 Length=2662522 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || ||| | || || ||| ||| || ||| | ||| Sbjct 955375 AAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCTTCGGATACAATAGAAAAT 955316 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| | |||||||||||| || || || ||||| ||||| Sbjct 955315 GTAAAGGCCAAGATTCATAATAAAGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTG 955256 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 | || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 955255 CCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCC 955196 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 955195 ACTCTTCATCTTGTGTTGAGACTTCG 955170 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 955170 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 955229 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || | ||||| || Sbjct 955230 CGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAG 955264 >seq33 Length=6086033 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||| | || || ||| || | ||| | ||| Sbjct 2214980 AAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGGTACAATGGAAAAT 2214921 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||||| || || ||||||||| || || || ||||| || || Sbjct 2214920 GTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATATTT 2214861 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 2214860 GCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCC 2214801 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 2214800 ACTCTTCATCTTGTGTTGAGACTTCG 2214775 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 2214775 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTG 2214834 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | |||||||||||| ||||| || || || || || Sbjct 2214835 CGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAG 2214869 >seq29 Length=5782310 Score = 127 bits (140), Expect = 5e-24 Identities = 166/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 ||||| ||| ||||| || ||||| || ||||| || || |||||| | || || Sbjct 156405 GCTAAGATG---CAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACTCTCGAGGTT 156461 Query 206221 GAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 |||| || || ||| | ||| |||||| |||||||| | || ||||||||| Sbjct 156462 GAAACCTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCT 156521 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || || || ||||| ||||| || || ||||| |||||||||||| || ||| | Sbjct 156522 CCTGATCAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCT 156581 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 || |||||| | || || || || |||||||| ||||| |||||||||| Sbjct 156582 GACTACAACATTCAAAAGGAATCCACTCTTCATCTTGTGTTGAGACTTC 156630 >seq949 Length=596474 Score = 113 bits (124), Expect = 1e-19 Identities = 155/216 (72%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| || || || || || || || ||||| |||| ||||| Sbjct 262383 AAAATG---CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAG 262327 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 |||||| ||||| || ||| ||||| ||||| ||||| || || || Sbjct 262326 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCT 262267 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || || |||||||| || || |||||| |||||||||| | ||| | | ||| Sbjct 262266 GACCAGCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 262207 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||| ||||||||||||| ||||| ||||| ||| Sbjct 262206 TACAACATCCAGAAAGAGTCAACTCTCCACCTGGTT 262171 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| ||||| ||||| ||||||||||||| || || |||| | ||| | |||||||| Sbjct 262171 AACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTC 262230 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 ||||||||| || || |||||||||| Sbjct 262231 CAGCTGCTTGCCAGCAAAGATAAGCC 262256 >seq1114 Length=1661397 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| ||||| || || || ||| || ||||||||||| || || ||| Sbjct 1503044 AAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGACTTATCTTTGCTGGCAAG 1502985 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||||||||| | ||| | | ||||||||| ||||||||||||| ||||| ||| Sbjct 1502984 CAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCAACTCTCCAC 1502925 Query 206374 CTTGTT 206379 || ||| Sbjct 1502924 CTGGTT 1502919 >seq786 Length=1074229 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || | | ||| || |||||| | || | ||| || || ||| | ||| Sbjct 712724 AAAACCCTTATGGAAAAGACCATCACTCTAGAGGCTGAACCCTCGGATACAATAGAAAAT 712665 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||| || || |||||||| || || || ||| ||||| Sbjct 712664 GTAAAGGCCGAGATTCACGATAAGTAAGGAATTCCTCCTGATCAGCAGAGATCAATCTTT 712605 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| |||||| | || |||||| | || || ||||| Sbjct 712604 GCTGGCAAGCAACTGGAAGATGGACCTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 712545 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 712544 ACTCTTCATCTTGTGTTGAGACTTCG 712519 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 712519 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 712578 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 204843 |||||||||||| ||||| || || ||||| Sbjct 712579 GGTCCATCTTCCAGTTGCTTGCCAGCAAAGAT 712610 >seq1198 Length=804178 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||| Sbjct 573728 AAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCACTGAAAAC 573787 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || || || ||| || || |||||||| Sbjct 573788 GTGAAGGCGAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTTATCTTT 573847 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | |||||||| ||||||||||||| Sbjct 573848 GCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAATATCCAGAAAGAGTCA 573907 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 573908 ACTCTCCACCTGGTT 573922 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| ||||| ||||| ||||||||||||| ||| || |||| | ||| | |||||||| Sbjct 573922 AACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTC 573863 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCC 204848 ||||||||| || || |||||||||| Sbjct 573862 CAGCTGCTTGCCAGCAAAGATAAGCC 573837 >seq34 Length=5890018 Score = 95.1 bits (104), Expect = 3e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| || || | ||||||||| || || || ||||| |||||| | || |||| Sbjct 5578111 AGATCCAGGATCAGGAAGGAATTCCTCCCGATCAGCAGAGACTGATCTTCACTGGCAAGC 5578052 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | |||||| |||| |||||| | || |||||| | || || |||||||||||||| | Sbjct 5578051 AACTGGAAGGTGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATC 5577992 Query 206375 TTGTTTTGAGACTTC 206389 |||| |||||||||| Sbjct 5577991 TTGTGTTGAGACTTC 5577977 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| ||||| |||||||||||||| || || | || ||||||| |||||| Sbjct 5577977 GAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 5578036 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 |||| ||||||| ||||| || | |||||| || Sbjct 5578037 GTCCACCTTCCAGTTGCTTGCCAGTGAAGATCAG 5578070 >seq119 Length=3329678 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || | || || || |||| | | | || ||| || || ||| | ||| Sbjct 527840 AAAACCCTTAGGGGGAAGACCATCATTCTCGGGGTTGAACTCTCGGATACAATAGAAAAT 527899 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTTATCTT 206303 |||||| |||||||| || || |||||||||| || || ||| ||||| ||||| Sbjct 527900 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGA---TCAGCAGACTGATCTT 527956 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||| | | |||||| | |||||| | || || ||||| Sbjct 527957 TGCTGGCAAGCACCTGGAAGAGGCACACACTTTGAC----TACAACATTCAAAAGGAGTC 528012 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| || || ||||||||||| Sbjct 528013 CACTCTTCATCTCGTGTTGAGACTTCG 528039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181761851886453