Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 seq33 89.7 5e-13 seq530 84.2 2e-11 seq476 84.2 2e-11 seq395 84.2 2e-11 >seq3 Length=9835568 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | |||||||||||||||||| || ||||| || ||||| ||| Sbjct 160805 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 160864 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || |||||||| || | |||||| ||||||||||||| Sbjct 160865 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 160902 >seq33 Length=6086033 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| || || || |||||| || || || || | | Sbjct 2214802 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 2214861 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||| ||||| ||||| || ||||| ||||| ||| ||| || | Sbjct 2214862 AATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTTGCCTTTACA 2214921 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||||| ||| | | || || || |||| || | || || || || || ||||| Sbjct 2214922 TTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTC 2214981 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 2214982 ACGAAAATCTGCAT 2214995 >seq530 Length=2118653 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| || || || |||||| || || || || | | Sbjct 63819 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 63878 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| |||| || ||||| ||||| ||| || || | Sbjct 63879 AAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 63938 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || || |||| || | || || || || || ||||| Sbjct 63939 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTC 63998 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 63999 ACGAAAATCTGCAT 64012 >seq476 Length=3007960 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||| || || ||||| |||| | || || || |||| | Sbjct 1868621 GACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATCTCCCAGTTGCTTGCCGGCA 1868680 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||||||||| |||| || |||| ||||| ||| || || | Sbjct 1868681 AAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATCCTGAATCTTGACCTTTACA 1868740 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| | | || || || || | || | || || ||||| || ||||| Sbjct 1868741 TTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGTCTTCCCAGTAAGGGTTTTC 1868800 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 1868801 ACGAAAATCTGCAT 1868814 >seq395 Length=2662522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| || || || |||||| || || || || | Sbjct 955197 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGC 955256 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| ||||| || |||||||||| ||| || || | Sbjct 955257 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATTATGAATCTTGGCCTTTACA 955316 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || || |||| || | || || || || || ||||| Sbjct 955317 TTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTC 955376 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 955377 ACGAAAATCTGCAT 955390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476588006907480