Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
seq33 89.7 5e-13
seq530 84.2 2e-11
seq476 84.2 2e-11
seq395 84.2 2e-11
>seq3
Length=9835568
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| || ||||| | |||||||||||||||||| || ||||| || ||||| |||
Sbjct 160805 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 160864
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|| |||||||| || | |||||| |||||||||||||
Sbjct 160865 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 160902
>seq33
Length=6086033
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || || || |||||| || || || || | |
Sbjct 2214802 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 2214861
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || | ||| ||||| ||||| || ||||| ||||| ||| ||| || |
Sbjct 2214862 AATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTTGCCTTTACA 2214921
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||||| ||| | | || || || |||| || | || || || || || |||||
Sbjct 2214922 TTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTC 2214981
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 2214982 ACGAAAATCTGCAT 2214995
>seq530
Length=2118653
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || || || |||||| || || || || | |
Sbjct 63819 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 63878
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| |||| || ||||| ||||| ||| || || |
Sbjct 63879 AAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 63938
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 63939 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTC 63998
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 63999 ACGAAAATCTGCAT 64012
>seq476
Length=3007960
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||| || || ||||| |||| | || || || |||| |
Sbjct 1868621 GACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATCTCCCAGTTGCTTGCCGGCA 1868680
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||||||||| |||| || |||| ||||| ||| || || |
Sbjct 1868681 AAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATCCTGAATCTTGACCTTTACA 1868740
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||| | | || || || || | || | || || ||||| || |||||
Sbjct 1868741 TTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGTCTTCCCAGTAAGGGTTTTC 1868800
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 1868801 ACGAAAATCTGCAT 1868814
>seq395
Length=2662522
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || || || |||||| || || || || |
Sbjct 955197 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGC 955256
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || |||||||||| ||| || || |
Sbjct 955257 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATTATGAATCTTGGCCTTTACA 955316
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 955317 TTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTC 955376
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 955377 ACGAAAATCTGCAT 955390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476588006907480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |