Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq339 113 1e-21
seq546 105 2e-19
seq423 98.7 3e-17
seq395 98.7 3e-17
seq47 98.7 3e-17
seq41 98.7 3e-17
seq772 95.1 4e-16
seq14 87.8 6e-14
>seq339
Length=3517115
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 739157 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 739216
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 739217 CCGGGTTTCAGC 739228
>seq546
Length=823206
Score = 105 bits (116), Expect = 2e-19
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 598912 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAC 598971
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 598972 CCCGGGTTTCGGC 598984
Score = 105 bits (116), Expect = 2e-19
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 599657 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAC 599598
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 599597 CCCGGGTTTCGGC 599585
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 559534 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 559593
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 559594 CCGGGTTTCGGC 559605
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 595990 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 596049
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 596050 CCGGGTTTCGGC 596061
>seq423
Length=1797783
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1672231 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1672172
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1672171 CCGGGTTTCGGC 1672160
Score = 91.5 bits (100), Expect = 5e-15
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| |||||||||||||||||||||| ||||||||||||| | |||||||||||||| | |
Sbjct 1678627 GCCGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATTTGAAGGTCCCTGGTTCGATC 1678568
Query 2829 CCGGG 2833
|||||
Sbjct 1678567 CCGGG 1678563
>seq395
Length=2662522
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 2458841 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2458900
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 2458901 CCGGGTTTCGGC 2458912
>seq47
Length=4803410
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 4301227 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4301168
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4301167 CCGGGTTTCGGC 4301156
>seq41
Length=5073459
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 4292784 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4292843
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4292844 CCGGGTTTCGGC 4292855
>seq772
Length=1036051
Score = 95.1 bits (104), Expect = 4e-16
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| || |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 212188 TGGCCGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 212129
Query 2827 CCCCGGG 2833
||||||
Sbjct 212128 TCCCGGG 212122
>seq14
Length=7158197
Score = 87.8 bits (96), Expect = 6e-14
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|| ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 4100307 AAATAGCTCAGTTGGGAGAGTGTTAGACTGCAGATCTAAAGGTCCCTGGTTTGACCCCGG 4100366
Query 2833 GCTTCAGC 2840
| ||| ||
Sbjct 4100367 GTTTCTGC 4100374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848925128985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |