Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 280 2e-70 seq537 176 5e-39 seq2231 158 1e-33 seq94 118 1e-21 seq210 91.5 2e-13 seq408 82.4 9e-11 >seq2 Length=17817800 Score = 280 bits (310), Expect = 2e-70 Identities = 254/320 (79%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 || |||||||| |||| | | |||||||||||||| || ||| | | |||||| ||| Sbjct 455064 GTCGTGACCCAAAATGAAAAAGAACTGCTGAACACGCCTGCTTCCTTAAGATGCTCTCTG 455005 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | ||| |||| || ||||||| || ||||||||||||||| | | ||||| Sbjct 455004 CAAAATTCCGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCTGTTAGCCCAGAA 454945 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | || || ||||| |||| ||||| ||||||||||| |||||||| | |||| Sbjct 454944 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCTTATAAAGGCAAG 454885 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||||||||| | |||| | ||||||||||| || || ||||| |||||| | Sbjct 454884 ATAAACATCACCCAGCTGGAACTCAAGAACTCAACCATTACCTTCTGGAACACCACCCTG 454825 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| ||||| |||||||| || || ||||| |||||||| |||||||| Sbjct 454824 GAGGATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCGGGA 454765 Query 171372 GTGGCCTGCCTCACCCTCTC 171391 |||||||||| |||||| Sbjct 454764 ACAGCCTGCCTCAGCCTCTC 454745 Score = 201 bits (222), Expect = 1e-46 Identities = 207/271 (76%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447 || | || |||||||| ||||| || || |||||||| ||||| |||| ||| || |||| Sbjct 452459 TCCCAGTACAGCCCACAGTGTTCCTTCAGTATAAATTCTTTGAAGACCGCCTAAATATCA 452400 Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507 | || ||||||||||||||||| | ||| ||| | ||||| | || ||||||| | Sbjct 452399 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAAGTGTCTGGGTCAGGGA 452340 Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567 |||||||||||| |||||||| | || | ||||| || || ||||| || || || | Sbjct 452339 TTGAAAACAGTACTGAGGTTCTCTTGCACCCCAATGGGACCACGTCTGTCACGAGCGTTC 452280 Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627 |||| || |||||||||||| ||||| |||| ||||| || ||||||| ||| ||||| Sbjct 452279 TCCAGGTCAAAGACCCCAAGCGTCAGGTGGGGAAGGAAGTGGTCTGCCAGGTGCTGCACC 452220 Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658 | || ||||| || | | | | ||||||| Sbjct 452219 TAGGGAATGTGACCAGTGTCACGCAAACTGT 452189 >seq537 Length=2461945 Score = 176 bits (194), Expect = 5e-39 Identities = 138/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 243273 CTTCAGGCCTGTGATGTGCGCGATCATGTAGGTGAGCAGAGCGTAGCTGGCGATGTTGAA 243332 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||||||||||||||||||||||||||||||||| || || ||||| |||| Sbjct 243333 GGGCACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTT 243392 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| || || ||||| Sbjct 243393 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 243437 >seq2231 Length=228578 Score = 158 bits (174), Expect = 1e-33 Identities = 133/166 (80%), Gaps = 12/166 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||| ||| | |||||||||| Sbjct 44928 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTAGAGGAGGTGA 44987 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||||| ||| | ||| ||||| |||||||| || |||| Sbjct 44988 TGCCCCAGGCTGAGAACCAC------------GACCCAGACATCAAGGAGCACGTGAACT 45035 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATG 178396 | |||||||||||||| |||||||| || ||||||||||||| || Sbjct 45036 CCCTGGGGGAAAAGCTGAAGACCCTCAGGCTGAGGCTGCGGCGTTG 45081 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| | ||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 47248 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 47307 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||| | |||||||||| || |||| Sbjct 47308 TAGAAACCTACATGACAATGAAGATGA 47334 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232 |||||||||||| ||||||||||||||||||| | ||||||| ||||||| ||||||||| Sbjct 44605 CAAATGAAGGACAAGCTGGACAACATGTTGTTGACTGGGTCCTTGCTGGAGGACTTTAAG 44664 Query 178233 G 178233 | Sbjct 44665 G 44665 >seq94 Length=4555704 Score = 118 bits (130), Expect = 1e-21 Identities = 529/825 (64%), Gaps = 41/825 (5%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || ||||||||| || |||| || | ||||||| ||||| | | |||||| Sbjct 695594 GTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTCAC 695653 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || |||||||||||| |||| |||||||||||||||||| |||| ||||| || ||| Sbjct 695654 GAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 695713 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGG---GAACTGG 8786 | |||| | | |||||||| || ||||||||| | || || || ||| || Sbjct 695714 CTTGCTTTTTCTATTCACCCTGGTGTTCTGGATTCAC-TATGCTTGGTGGAATGAATGGG 695772 Query 8787 TGGGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACT 8846 | ||| | | |||||||||| | | || |||| || ||| | Sbjct 695773 TTTTTGGCTCTTC--------CATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGCTT 695824 Query 8847 GTACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTA 8906 ||||| || || | || |||| |||| |||| | ||| |||| || || | || | Sbjct 695825 ATACAGTGAGATCTTTTTCATCAGCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCA 695884 Query 8907 CGCGGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGC 8966 || ||| | | | | ||| || | | || || || | || | || | Sbjct 695885 TGCCGTGTTTGCCCTTCGAGCCCGGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCAC 695944 Query 8967 CTGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAAT-CCAATAA-- 9023 |||| ||||| | | | | | || | || || |||||||| |||| | |||| || Sbjct 695945 CTGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAAGA 696004 Query 9024 --TGCCACAG---GCAAGGGGGTCT-----GCCAAGCCTCCTACACAGACTTTTGGAAGG 9073 | | |||| | | | || |||| || | | |||| |||||| Sbjct 696005 CGTCCAACAGTTTGTCTGCTTGCCTATTTACCCAAAAAACCAAGA-AGACAGATGGAAGC 696063 Query 9074 GGGTTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCT 9133 | | ||| | || |||| || | |||| |||||| |||| ||||||| Sbjct 696064 GTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCACTCTGCCTCTGCTCATCATGGTTG 696123 Query 9134 TCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTG 9192 ||||||||| ||| || || ||| || | | |||| ||| || ||| Sbjct 696124 TCTGCTACTCTGGAATTATTAAAACCCTGCTGAGATGCCC----CAGTAAGAAAAAGTAC 696179 Query 9193 CACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTAC 9252 | ||| || ||||||||| |||| ||||| | | ||| | || |||| |||||| Sbjct 696180 AAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTAC 696239 Query 9253 AACGTCCTGCTCATTTTACAC-ACCTACCAAGAGGCCATTTTTG-GGCCAGACTGTGAAG 9310 ||||| | ||| || ||| | | ||| | | | |||| | |||| |||||| Sbjct 696240 AACGTGGTCCTC-TTCCTCACGGCTTTTCAAACGATCTTCTTTGAGACCAG-CTGTGA-- 696295 Query 9311 CGCGGCGCA---GGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACT 9367 || | ||| | ||||| ||||| | |||| | ||| ||||||||| ||| |||| Sbjct 696296 -GCAGAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACT 696354 Query 9368 GCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 |||||||||||||| |||||||||| || || || || | ||||| Sbjct 696355 GCTGCGTCAACCCCATCATCTACGCCTTCGTAGGGGAGAGGTTCC 696399 Score = 114 bits (126), Expect = 2e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||||||| | |||| || | ||||| ||||||| |||| |||||||| Sbjct 651830 GTACTCGCTGGTGTTCATCGTTGGCCTGGTGGGCAACATCCTGGTGCTCCTGGTCCTCAT 651771 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || |||||||||||| || |||||||| ||||| ||| |||| |||||| || || Sbjct 651770 GCAGAACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAATCTGGCCATTTCAGA 651711 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGAT 8762 |||||| | | ||||| || ||||| ||||| Sbjct 651710 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGAT 651678 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382 ||||| ||||| | |||| | ||| ||||||||| ||| |||||||||| |||||||| Sbjct 651114 TGGACCTGGCCTTGCAGGTGACAGAGGTGATCGCCTACACGCACTGCTGCGCCAACCCCG 651055 Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 |||||||||| || || || || | ||||| Sbjct 651054 TCATCTACGCCTTCGTCGGGGAGAGGTTCC 651025 >seq210 Length=2351586 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 146915 TTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGT 146974 || |||| |||||||||| || ||||||| || || || |||| || | |||| Sbjct 112447 TTCTCAGCAGCTCCACGTGATTCAGGTAGATATGTGCATCTCCCAAAGTAATTATGAAGT 112388 Query 146975 CCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCT- 147033 | ||||| ||||| || ||| | |||||||| ||||||| | || ||| Sbjct 112387 TAGCTGGCTTCAGGCCTGTGCTGTGTGAGACCATGTAAATGAGCAGGGCCTACACAGCTG 112328 Query 147034 ATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC 147093 ||| ||||||| | |||||||||||| | | ||||| ||| | | |||||| || ||| Sbjct 112327 ATGATGAAGGGCTCACCCAGGCCCATGGCTCAAGACCTGTGGCAAACCTGGCAGGACAGC 112268 Query 147094 TCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 || || | | | || ||| |||||||| |||| || | ||| |||| Sbjct 112267 TCACCATTCACAGCATAGAACCGGCACAGGGCGTGGTGGGGAGACAGGGCCA 112216 >seq408 Length=2225874 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| ||||| ||| ||||||| || |||| ||| | ||||| | | ||||| | Sbjct 1160871 TACTCCCTGGTCTTTCTGTTTGGTCTCCTTGGAAATTCTGTGGTGGTTGTGGTCCTGTTC 1160812 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||||||||||||||| | |||||| | | | |||| ||||||| ||| | ||| Sbjct 1160811 AAGTACAAGAGGCTCAAGTCCATGACAGATGTGTACCTGCTCAACCTTGCCATCTCAGAC 1160752 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 ||||| | | || ||||||| || ||| Sbjct 1160751 CTGCTCTTCGTGCTCTCCCTCCCTTTCTGG 1160722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583459606015200