Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq2 280 2e-70
seq537 176 5e-39
seq2231 158 1e-33
seq94 118 1e-21
seq210 91.5 2e-13
seq408 82.4 9e-11
>seq2
Length=17817800
Score = 280 bits (310), Expect = 2e-70
Identities = 254/320 (79%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131
|| |||||||| |||| | | |||||||||||||| || ||| | | |||||| |||
Sbjct 455064 GTCGTGACCCAAAATGAAAAAGAACTGCTGAACACGCCTGCTTCCTTAAGATGCTCTCTG 455005
Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191
|| | ||| |||| || ||||||| || ||||||||||||||| | | |||||
Sbjct 455004 CAAAATTCCGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCTGTTAGCCCAGAA 454945
Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251
|||||| | || || ||||| |||| ||||| ||||||||||| |||||||| | ||||
Sbjct 454944 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCTTATAAAGGCAAG 454885
Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311
||||||||||||||||| | |||| | ||||||||||| || || ||||| |||||| |
Sbjct 454884 ATAAACATCACCCAGCTGGAACTCAAGAACTCAACCATTACCTTCTGGAACACCACCCTG 454825
Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371
||||| || ||||| ||||| |||||||| || || ||||| |||||||| ||||||||
Sbjct 454824 GAGGATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCGGGA 454765
Query 171372 GTGGCCTGCCTCACCCTCTC 171391
|||||||||| ||||||
Sbjct 454764 ACAGCCTGCCTCAGCCTCTC 454745
Score = 201 bits (222), Expect = 1e-46
Identities = 207/271 (76%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447
|| | || |||||||| ||||| || || |||||||| ||||| |||| ||| || ||||
Sbjct 452459 TCCCAGTACAGCCCACAGTGTTCCTTCAGTATAAATTCTTTGAAGACCGCCTAAATATCA 452400
Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507
| || ||||||||||||||||| | ||| ||| | ||||| | || ||||||| |
Sbjct 452399 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAAGTGTCTGGGTCAGGGA 452340
Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567
|||||||||||| |||||||| | || | ||||| || || ||||| || || || |
Sbjct 452339 TTGAAAACAGTACTGAGGTTCTCTTGCACCCCAATGGGACCACGTCTGTCACGAGCGTTC 452280
Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627
|||| || |||||||||||| ||||| |||| ||||| || ||||||| ||| |||||
Sbjct 452279 TCCAGGTCAAAGACCCCAAGCGTCAGGTGGGGAAGGAAGTGGTCTGCCAGGTGCTGCACC 452220
Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658
| || ||||| || | | | | |||||||
Sbjct 452219 TAGGGAATGTGACCAGTGTCACGCAAACTGT 452189
>seq537
Length=2461945
Score = 176 bits (194), Expect = 5e-39
Identities = 138/165 (84%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | ||||||||||||||| | ||||||||| ||||||||
Sbjct 243273 CTTCAGGCCTGTGATGTGCGCGATCATGTAGGTGAGCAGAGCGTAGCTGGCGATGTTGAA 243332
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || ||||||||||||||||||||||||||||||||||| || || ||||| ||||
Sbjct 243333 GGGCACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTT 243392
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||||||| |||||||| ||| |||||||| || || |||||
Sbjct 243393 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 243437
>seq2231
Length=228578
Score = 158 bits (174), Expect = 1e-33
Identities = 133/166 (80%), Gaps = 12/166 (7%)
Strand=Plus/Plus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| |||||||| |||||||| ||||| ||| | ||||||||||
Sbjct 44928 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTAGAGGAGGTGA 44987
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| ||||| ||||| ||| | ||| ||||| |||||||| || ||||
Sbjct 44988 TGCCCCAGGCTGAGAACCAC------------GACCCAGACATCAAGGAGCACGTGAACT 45035
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATG 178396
| |||||||||||||| |||||||| || ||||||||||||| ||
Sbjct 45036 CCCTGGGGGAAAAGCTGAAGACCCTCAGGCTGAGGCTGCGGCGTTG 45081
Score = 89.7 bits (98), Expect = 6e-13
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| | ||||| |||||||| |||||||||||||| || || || |||||||
Sbjct 47248 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 47307
Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548
||||| | |||||||||| || ||||
Sbjct 47308 TAGAAACCTACATGACAATGAAGATGA 47334
Score = 87.8 bits (96), Expect = 2e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232
|||||||||||| ||||||||||||||||||| | ||||||| ||||||| |||||||||
Sbjct 44605 CAAATGAAGGACAAGCTGGACAACATGTTGTTGACTGGGTCCTTGCTGGAGGACTTTAAG 44664
Query 178233 G 178233
|
Sbjct 44665 G 44665
>seq94
Length=4555704
Score = 118 bits (130), Expect = 1e-21
Identities = 529/825 (64%), Gaps = 41/825 (5%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
||| || ||||||||| || |||| || | ||||||| ||||| | | ||||||
Sbjct 695594 GTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTCAC 695653
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| |||||||||||| |||| |||||||||||||||||| |||| ||||| || |||
Sbjct 695654 GAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 695713
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGG---GAACTGG 8786
| |||| | | |||||||| || ||||||||| | || || || ||| ||
Sbjct 695714 CTTGCTTTTTCTATTCACCCTGGTGTTCTGGATTCAC-TATGCTTGGTGGAATGAATGGG 695772
Query 8787 TGGGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACT 8846
| ||| | | |||||||||| | | || |||| || ||| |
Sbjct 695773 TTTTTGGCTCTTC--------CATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGCTT 695824
Query 8847 GTACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTA 8906
||||| || || | || |||| |||| |||| | ||| |||| || || | || |
Sbjct 695825 ATACAGTGAGATCTTTTTCATCAGCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCA 695884
Query 8907 CGCGGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGC 8966
|| ||| | | | | ||| || | | || || || | || | || |
Sbjct 695885 TGCCGTGTTTGCCCTTCGAGCCCGGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCAC 695944
Query 8967 CTGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAAT-CCAATAA-- 9023
|||| ||||| | | | | | || | || || |||||||| |||| | |||| ||
Sbjct 695945 CTGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAAGA 696004
Query 9024 --TGCCACAG---GCAAGGGGGTCT-----GCCAAGCCTCCTACACAGACTTTTGGAAGG 9073
| | |||| | | | || |||| || | | |||| ||||||
Sbjct 696005 CGTCCAACAGTTTGTCTGCTTGCCTATTTACCCAAAAAACCAAGA-AGACAGATGGAAGC 696063
Query 9074 GGGTTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCT 9133
| | ||| | || |||| || | |||| |||||| |||| |||||||
Sbjct 696064 GTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCACTCTGCCTCTGCTCATCATGGTTG 696123
Query 9134 TCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTG 9192
||||||||| ||| || || ||| || | | |||| ||| || |||
Sbjct 696124 TCTGCTACTCTGGAATTATTAAAACCCTGCTGAGATGCCC----CAGTAAGAAAAAGTAC 696179
Query 9193 CACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTAC 9252
| ||| || ||||||||| |||| ||||| | | ||| | || |||| ||||||
Sbjct 696180 AAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTAC 696239
Query 9253 AACGTCCTGCTCATTTTACAC-ACCTACCAAGAGGCCATTTTTG-GGCCAGACTGTGAAG 9310
||||| | ||| || ||| | | ||| | | | |||| | |||| ||||||
Sbjct 696240 AACGTGGTCCTC-TTCCTCACGGCTTTTCAAACGATCTTCTTTGAGACCAG-CTGTGA-- 696295
Query 9311 CGCGGCGCA---GGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACT 9367
|| | ||| | ||||| ||||| | |||| | ||| ||||||||| ||| ||||
Sbjct 696296 -GCAGAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACT 696354
Query 9368 GCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412
|||||||||||||| |||||||||| || || || || | |||||
Sbjct 696355 GCTGCGTCAACCCCATCATCTACGCCTTCGTAGGGGAGAGGTTCC 696399
Score = 114 bits (126), Expect = 2e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| |||||||| | |||| || | ||||| ||||||| |||| ||||||||
Sbjct 651830 GTACTCGCTGGTGTTCATCGTTGGCCTGGTGGGCAACATCCTGGTGCTCCTGGTCCTCAT 651771
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| |||||||||||| || |||||||| ||||| ||| |||| |||||| || ||
Sbjct 651770 GCAGAACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAATCTGGCCATTTCAGA 651711
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGAT 8762
|||||| | | ||||| || ||||| |||||
Sbjct 651710 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGAT 651678
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382
||||| ||||| | |||| | ||| ||||||||| ||| |||||||||| ||||||||
Sbjct 651114 TGGACCTGGCCTTGCAGGTGACAGAGGTGATCGCCTACACGCACTGCTGCGCCAACCCCG 651055
Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412
|||||||||| || || || || | |||||
Sbjct 651054 TCATCTACGCCTTCGTCGGGGAGAGGTTCC 651025
>seq210
Length=2351586
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 146915 TTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGT 146974
|| |||| |||||||||| || ||||||| || || || |||| || | ||||
Sbjct 112447 TTCTCAGCAGCTCCACGTGATTCAGGTAGATATGTGCATCTCCCAAAGTAATTATGAAGT 112388
Query 146975 CCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCT- 147033
| ||||| ||||| || ||| | |||||||| ||||||| | || |||
Sbjct 112387 TAGCTGGCTTCAGGCCTGTGCTGTGTGAGACCATGTAAATGAGCAGGGCCTACACAGCTG 112328
Query 147034 ATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC 147093
||| ||||||| | |||||||||||| | | ||||| ||| | | |||||| || |||
Sbjct 112327 ATGATGAAGGGCTCACCCAGGCCCATGGCTCAAGACCTGTGGCAAACCTGGCAGGACAGC 112268
Query 147094 TCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145
|| || | | | || ||| |||||||| |||| || | ||| ||||
Sbjct 112267 TCACCATTCACAGCATAGAACCGGCACAGGGCGTGGTGGGGAGACAGGGCCA 112216
>seq408
Length=2225874
Score = 82.4 bits (90), Expect = 9e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670
||||| ||||| ||| ||||||| || |||| ||| | ||||| | | ||||| |
Sbjct 1160871 TACTCCCTGGTCTTTCTGTTTGGTCTCCTTGGAAATTCTGTGGTGGTTGTGGTCCTGTTC 1160812
Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730
|||||||||||||||| | |||||| | | | |||| ||||||| ||| | |||
Sbjct 1160811 AAGTACAAGAGGCTCAAGTCCATGACAGATGTGTACCTGCTCAACCTTGCCATCTCAGAC 1160752
Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760
||||| | | || ||||||| || |||
Sbjct 1160751 CTGCTCTTCGTGCTCTCCCTCCCTTTCTGG 1160722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583459606015200
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