Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 262 3e-65
seq417 197 1e-45
seq1832 156 3e-33
seq148 107 2e-18
seq537 86.0 5e-12
seq528 86.0 5e-12
seq158 86.0 5e-12
>seq1020
Length=850931
Score = 262 bits (290), Expect = 3e-65
Identities = 630/940 (67%), Gaps = 20/940 (2%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | || || || | || ||| || ||||| | ||| || ||||| ||||
Sbjct 338176 TTTGTCATCTTCCCCATCGAGTACTGTGATATTTGGCAGAGGTATAAGAAAGCTGAGGCT 338235
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817
|| ||||||||||| ||| | || ||| | | || ||| | ||||| | ||| | | |
Sbjct 338236 TCCTTTTGGACAGCTGAAAAGGTGGATCTTTCCAAGGACATTCAGCAC-TGGGAATCCCT 338294
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
|| || | || | | | |||||||| ||| |||| || ||||| ||||| || |
Sbjct 338295 GAAG-CCTGAGGAGAGATACTTTATATCCCACGTTCTGGCTTTCTTTGCAGCGAGTGATG 338353
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| || || |||||||| ||||| |||||| ||||||||||| |||| |||||||
Sbjct 338354 GCATCGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTA-CAGAAGCC 338412
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
|| ||||| |||| || ||| ||||||| ||||| || ||||| || |||||||||||
Sbjct 338413 CGCTGTTTCTATGACTTCCAATTTGCCATGGAAAACATCCATTCTGAGATGTACAGTCTC 338472
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| | || || || || |||||| | || | | | | || || || || ||
Sbjct 338473 CTCACTGACACTTATATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCCATCGAG 338532
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGA-TAAATTCAA--AT 44113
||| | ||| | || | || ||||| |||||| | | |||| | ||| |
Sbjct 338533 ACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGACTGGGGACAAAGAG 338592
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | || ||||| |||| || ||||| | ||||||||| || ||||||| ||
Sbjct 338593 GGTACCTACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAAGGAATCCTCTTTTCTGGT 338652
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | ||||| ||| | |||||||| || |||||||||| | | |||||
Sbjct 338653 TCTTTTGCATCGATATTCTGGCTCAAGAAACGTGGCCTGATGCCTGGCCTCGCCTTTTCC 338712
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| | | || | ||||| || ||||| || || ||||| ||| || | | |
Sbjct 338713 AATGAACTTACTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAA 338772
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || | | | || ||||| ||| | | | || || || | | || ||
Sbjct 338773 CACCT---GGTCCACAAACCTTCCGAGCAGAGAGTGAAGGAAATAATTATTAATGCCGTT 338829
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
|||||| || || || | || || || ||||| || | || || ||||| ||
Sbjct 338830 CGGATAGAGCAGGAGTTCCTCACGGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGC 338889
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
|| || ||||| || |||||||| | | | ||||| || | | |||| || ||||
Sbjct 338890 AC-ATTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAGCTAGGTTT 338948
Query 44473 CGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532
| || | | ||| |||| || ||||| |||||||| |||||||| |||||||
Sbjct 338949 TGGCAAGGTTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATATTTCACTGGAAGG 339008
Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA- 44591
|| || ||| ||||| || | || || ||||||||| | ||||| | ||| ||
Sbjct 339009 GAAGACTAAC---TTTGAGAAGAGAGTAGGCGAATATCAGAGGATGGGAATGATGTCAAG 339065
Query 44592 --CAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629
||| || ||| ||||| ||||| || ||||||
Sbjct 339066 TCCAACAGAGAATTCTTTTACCTTGGATGCTGACTTCTAA 339105
>seq417
Length=2207251
Score = 197 bits (218), Expect = 1e-45
Identities = 496/748 (66%), Gaps = 12/748 (2%)
Strand=Plus/Minus
Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTA 43947
||||| ||||| ||||| |||||||||||| |||| ||||||| || ||||| ||
Sbjct 864361 GAAAACTTGGTGGAGCGGTTAA-GCAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTA 864304
Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007
||| || |||||| |||| ||||| |||||||| || ||||| ||||| || || || ||
Sbjct 864303 TGGCTTCCAAATTACCATGGAAAACATTCATTCTGAGATGTATAGTCTCCTCATTGACAC 864244
Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGC 44067
||||| |||||| | || | | | | || || || || || ||| | |||
Sbjct 864243 TTACATTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAACGCCATGGAGACAATGCCTTG 864184
Query 44068 GATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGG 44124
| || | | |||| ||||||| | ||||| | | | | | | | ||
Sbjct 864183 TGTAAAGAAGGAGGCAGCCTGGGCCTTGCGTTGGATCGGGGACAAAGAGGCTACCTACGG 864124
Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184
||||| |||| | ||||| | ||||||||| || |||||||| || || |||| | |
Sbjct 864123 GGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGAGTC 864064
Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244
||||| ||| | |||||||| | |||||||||| | |||||||| ||||| | ||
Sbjct 864063 GATATTCTGGCTCAAGAAACGCAGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTAT 864004
Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGA 44304
|| | ||||| || ||||| || || ||||| ||| || | | | | || |
Sbjct 864003 TAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACACCT---GGT 863947
Query 44305 CGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACA 44364
| | || ||||| || | | | || || || | | || || ||||||| ||
Sbjct 863946 CCACAAACCTTCCGAGCAGGGAGTGAAGGAAATAATTATTAATGCCGTTCAGATAGAGCA 863887
Query 44365 AGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAA 44424
| ||| || | || || || | || || || || |||||| | || |||||
Sbjct 863886 GGGATTCATCAAGGAGGCCTTGCCCATGAAGTTCATTGGGATGAATTGCATGTTAATGAA 863827
Query 44425 CCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTA 44484
|| |||||||| | | | ||||| || | | |||| || |||| | || |
Sbjct 863826 GCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAGCTAGGTTTTGGCAAGGTTTT 863767
Query 44485 TATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTT 44544
||| |||| || ||||| | |||||| |||||||| ||||||| || || |||||
Sbjct 863766 CGGAGTAGAAAATCCATTTGACTATATGGAGAATATTTCACTGGAAGGGAAGACTAACTT 863707
Query 44545 TTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAA 44601
|||| || | || || || |||||| | ||||| | ||| || ||| || ||
Sbjct 863706 CTTTGTGAAGAGAGTAGGCGAGTATCAGAGGATGGGAATGATGTCAAGTCCAACAGAGAA 863647
Query 44602 TAAATTTACTACGGATGAAGATTTCTAA 44629
| ||||| ||||| || ||||||
Sbjct 863646 TTCTTTTACCTTGGATGCTGACTTCTAA 863619
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743
|||||| || | | |||||| | || || || | || ||||| || ||||| |||||
Sbjct 864761 AGAAAACCCTCGTCGCTTTGTCATCTTCCCTATCGAGTACCATGATATTTGGCAGATGTA 864702
Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC--TTA 43801
|| ||||| |||| || ||||||||||| |||||||| ||| | | || ||| | |
Sbjct 864701 TAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAAGTGGATCTTTCCAAGGACATTCA 864642
Query 43802 GCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTT 43861
|| | ||| | | | || || | || | | | |||||||| ||| |||| ||
Sbjct 864641 GC-CGCGGGAAT-CCCTGAAGCCTGAGGAGAGATACTTTATATCCCATGTTCTGGCTTTC 864584
Query 43862 TTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGT 43899
||||| |||| | ||| || || ||||||| |||||
Sbjct 864583 TTTGCGCCGAGTGCCGGCATGGTAAATGAAAGCTTGGT 864546
>seq1832
Length=302895
Score = 156 bits (172), Expect = 3e-33
Identities = 597/925 (65%), Gaps = 27/925 (3%)
Strand=Plus/Minus
Query 43679 CTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAA 43738
|| |||||||| || | | ||| || | || || || | |||||||| | |||||
Sbjct 207362 CTGACAGAAAACCCTCTTTGCTTTCTCATCTTCCCTATGGAGTATCATGATCTTTGGCAG 207303
Query 43739 ATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC 43798
|||| || ||||| |||| || ||||||||||| |||| || || | | || |||
Sbjct 207302 ATGTGTAAGAAAGCTGAGGCTTCTTTTTGGACAGCTAAAGAGGTGAATCTTTCCAAGGAC 207243
Query 43799 TT--AGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCT----TTG--G 43850
| ||||| | ||| | | | || || | || | | |||||||| | || |
Sbjct 207242 ATTCAGCAC-TGGGAATCCCTGAAG-CCTGAGGAGAGAGATTTTATACCCCACGTTCACG 207185
Query 43851 TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTT 43909
|| |||| || |||| || || | || ||||| |||||||| ||||| ||| ||| |
Sbjct 207184 TTCTGGCTTTCTTTGTGGCAAGTGTTGGCATAGTAAATGAAAACTTGGTGGAGT-GGTGT 207126
Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969
| ||||| ||||| | ||||||| | ||||| ||||| || ||||||||||| |||
Sbjct 207125 GGCCAAGAGGTTCAGATGACAGAAGCCTGCTGTTTCTATGGCTTCCAAATTGCCATGGAA 207066
Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAG 44029
|| || ||||| || |||| ||||| || | || || || || ||||| | |||
Sbjct 207065 AACATCCATTCTGAGATGTGTAGTCTCCTCACTGACACTTATAT--AAGATTCCAAAGAG 207008
Query 44030 AAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGG 44089
| | | | || || | || || ||| | ||| | | || ||| | |||
Sbjct 207007 AGGGAATTTCTCTTCAACACCATGGAGACAATGCCTTGTGGAAGGAAGAAGGCAAATTGG 206948
Query 44090 GCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCA 44146
||| | | ||| | | | | | | | | || ||| | |||| | |||||
Sbjct 206947 GCCTTGCATTGGGTTGGGGACAAAGAGGCTACCTACGGGGAATGGGTTGTGGACTTTGCT 206888
Query 44147 GTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGA 44206
| |||||| || | ||||| || || | |||| |||| ||| | |||||| |
Sbjct 206887 GCCACGGAAGGAATCTCCTTTTTTGGTTCTTCTGCGTTGATATACTGGCTCAAGAAATGC 206828
Query 44207 GGTTTGATGCCTGGGTTGAC-GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACA 44265
| |||||||||| | || |||||| |||||| | || || | ||||| || |||||
Sbjct 206827 AGCCTGATGCCTGGCCTCACTGTTTTCCAATGAGCTTATTAGCAGAGATGAGGGTTTACA 206768
Query 44266 TTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGAC 44325
| || ||||| | | || | | | | || | | |||| |||||| |||
Sbjct 206767 CCGTGACTTTGCCTACCTGATGTTCAAACACCT---GGTCCATAAACCTTCAGAGCAGAG 206711
Query 44326 AATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATT 44385
| | | || || || | | || || | |||||| || || || | || || ||
Sbjct 206710 AGTGAAGGAAATAATTATCAAAGCCGTTAGGATAGACCAGGAGTTCCTCCCAGAGGCCTT 206651
Query 44386 ACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGC 44445
|| | || | || || |||||| | || || || || |||||||||| ||| ||
Sbjct 206650 GCCGCTGAAGCTCATTGGGATGAATTGCATGTTAATAAAGCAGTATATTGAATTCATGGC 206591
Query 44446 AGATCGTTTACTT---TTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTT 44502
||| | |||| |||||| |||| || | | ||| |||| || ||
Sbjct 206590 AGA---CTGACTTAGGCAGGAACTAGGTTTTAGCAAGGTTTCCAGAGTAGAAAATCCATT 206534
Query 44503 TGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGG 44562
||| ||||||| |||||||| ||||||| || || ||| | ||||| || | | ||
Sbjct 206533 TGACCTTATGGAGAATATTTCACTGGAAGGGAAGACTAACCTCTTTGAGAAGAGAGGAGG 206474
Query 44563 AGAATATCAGCGAATGGGCGTCATG 44587
|| |||||| | || || || |||
Sbjct 206473 TGAGTATCAGAGGATAGGAGTGATG 206449
>seq148
Length=4816872
Score = 107 bits (118), Expect = 2e-18
Identities = 96/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| ||||||||||| ||||| |||||| || ||||| ||||| || ||||||||
Sbjct 2364296 CGGTTTAGCCAAGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGGCTTCCAAATTGC 2364238
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || ||||| || ||||||||||| || || || || || || ||||||
Sbjct 2364237 CATGGAAAACATCCATTCTGAGATGTACAGTCTCCTCATTGACACTTATATTAAAGAT 2364180
>seq537
Length=2461945
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| | || || || ||| | || ||||| ||||| || || || ||||
Sbjct 243439 TGATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAACGGCGAGCTGT 243380
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| ||||| |||| || || || || |||||||| || || || || || ||||| || |
Sbjct 243379 CCTGTCAGCTGTACCAGAGGTCGGGGGACATGGGCCTGGGTGTGCCCTTCAACATCGCCA 243320
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198
| || ||||||||||| || ||||| || |||
Sbjct 243319 GCTACGCTCTGCTCACCTACATGATCGCGCAC 243288
>seq528
Length=1363295
Score = 86.0 bits (94), Expect = 5e-12
Identities = 116/162 (72%), Gaps = 6/162 (4%)
Strand=Plus/Plus
Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599
|| ||| ||||||||| || || | |||||| | || || ||||| ||||| |||||
Sbjct 1127769 AACAGTGGTTTGCACATAATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 1127828
Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653
||||| | ||||| ||||||||||| ||||| || | ||||| ||| |
Sbjct 1127829 AGCATGGCTGGTAGCACAGGAGTTCATGACACTGTCGTCAACCAGTTGCTGTCCAAAATT 1127888
Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695
|| || || | |||||||| || || ||||| ||||| |||
Sbjct 1127889 GATGGGGTAGAGCAACTGAACAACATCTTAGTCATTGGTATG 1127930
>seq158
Length=7371824
Score = 86.0 bits (94), Expect = 5e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || |||||||||||||| || ||||| || ||||| |||||||| || ||||| |
Sbjct 3476933 AAAATCCCTTTGATTTTATGGAGAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 3476992
Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
|||| |||| ||| ||||| || | | ||||||
Sbjct 3476993 AACGAGTTGCAGAGTATCAACGTTTTGCAGTCATG 3477027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397437142327465
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