Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq314 104 2e-17 seq85 95.1 1e-14 seq174 91.5 1e-13 seq3 84.2 2e-11 seq2164 82.4 6e-11 seq199 82.4 6e-11 >seq314 Length=2398313 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || ||||| ||||| || | || | ||||| Sbjct 2323440 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 2323499 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || |||| |||||||| || || ||||| | ||||| || || | Sbjct 2323500 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 2323559 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | | || | |||||| ||| || || || || || || | ||| Sbjct 2323560 ATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 2323619 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 |||||||| || ||||||||||| ||||| |||| Sbjct 2323620 CCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 2323654 >seq85 Length=4131313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || ||||| ||||| || | || | ||||| Sbjct 1818202 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 1818261 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || |||| |||||||| || || ||||| | ||||| || || | Sbjct 1818262 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 1818321 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | | || | || ||| ||| || || || || || || | ||| Sbjct 1818322 ATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 1818381 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || ||||| || ||||||||||| ||||| |||| Sbjct 1818382 CCTGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 1818416 >seq174 Length=4297676 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTCGT 27093 ||| || | ||| | || || || |||||||| ||||||| | || ||| || || Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCT-GT 3533452 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 |||| || || || || ||| | || || | ||| ||||| || || | || || |||| Sbjct 3533451 CTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTAT 3533392 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | ||||||| || | ||||||| || |||| || ||||| || ||||| || | Sbjct 3533391 CCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGG 3533332 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||| | || ||||||||||| || ||||| Sbjct 3533331 TCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 >seq3 Length=9835568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 |||||||| ||| |||||||| ||||| |||||||||||||| || || ||||| Sbjct 157385 GCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATCTGCTTATTC 157444 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 | | | | |||| ||||| ||||| | |||| | ||||||||| ||||| ||| Sbjct 157445 AGTAGCTGGGCTTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAGA 157504 Query 131150 CCCTGTATCCC 131160 || |||| ||| Sbjct 157505 CCTTGTACCCC 157515 >seq2164 Length=79412 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || |||||||| || ||||| | ||| || | | | | ||| Sbjct 52107 ACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTCC 52048 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || | |||| |||||||| || || ||||| | |||||| || || | Sbjct 52047 AGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGG 51988 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | | || |||||| ||| || || | || || || | ||| Sbjct 51987 ATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTTG 51928 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 |||||||| || ||||||||||| ||| | |||| Sbjct 51927 CCCGTCAGGGTCTTCACAAAGATCTGCGTCTCTGC 51893 >seq199 Length=3010087 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || ||||| ||||| | | || | ||||| Sbjct 689105 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACCGAGTACGGCCATCTTCC 689046 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || || | |||| ||| || || ||||| | ||||| || || | Sbjct 689045 AGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 688986 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| ||| | | || ||||| ||| ||||| || || || || | ||| Sbjct 688985 ATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTG 688926 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 |||||||| || |||||| |||| ||||| |||| Sbjct 688925 CCCGTCAGGGTCTTCACAGAGATCTGCATCTCTGC 688891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424914238589016