Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq314 104 2e-17
seq85 95.1 1e-14
seq174 91.5 1e-13
seq3 84.2 2e-11
seq2164 82.4 6e-11
seq199 82.4 6e-11
>seq314
Length=2398313
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || ||||| ||||| || | || | |||||
Sbjct 2323440 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 2323499
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || || |||| |||||||| || || ||||| | ||||| || || |
Sbjct 2323500 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 2323559
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||| | | || | |||||| ||| || || || || || || | |||
Sbjct 2323560 ATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 2323619
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|||||||| || ||||||||||| ||||| ||||
Sbjct 2323620 CCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 2323654
>seq85
Length=4131313
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || ||||| ||||| || | || | |||||
Sbjct 1818202 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCC 1818261
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || || |||| |||||||| || || ||||| | ||||| || || |
Sbjct 1818262 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 1818321
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||| | | || | || ||| ||| || || || || || || | |||
Sbjct 1818322 ATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 1818381
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|| ||||| || ||||||||||| ||||| ||||
Sbjct 1818382 CCTGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 1818416
>seq174
Length=4297676
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTCGT 27093
||| || | ||| | || || || |||||||| ||||||| | || ||| || ||
Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCT-GT 3533452
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
|||| || || || || ||| | || || | ||| ||||| || || | || || ||||
Sbjct 3533451 CTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTAT 3533392
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| ||||||| || | ||||||| || |||| || ||||| || ||||| || |
Sbjct 3533391 CCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGG 3533332
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| ||| | || ||||||||||| || |||||
Sbjct 3533331 TCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298
>seq3
Length=9835568
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089
|||||||| ||| |||||||| ||||| |||||||||||||| || || |||||
Sbjct 157385 GCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATCTGCTTATTC 157444
Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149
| | | | |||| ||||| ||||| | |||| | ||||||||| ||||| |||
Sbjct 157445 AGTAGCTGGGCTTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAGA 157504
Query 131150 CCCTGTATCCC 131160
|| |||| |||
Sbjct 157505 CCTTGTACCCC 157515
>seq2164
Length=79412
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || |||||||| || ||||| | ||| || | | | | |||
Sbjct 52107 ACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTCC 52048
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || | |||| |||||||| || || ||||| | |||||| || || |
Sbjct 52047 AGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGG 51988
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||| | | || |||||| ||| || || | || || || | |||
Sbjct 51987 ATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTTG 51928
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|||||||| || ||||||||||| ||| | ||||
Sbjct 51927 CCCGTCAGGGTCTTCACAAAGATCTGCGTCTCTGC 51893
>seq199
Length=3010087
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || ||||| ||||| | | || | |||||
Sbjct 689105 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACCGAGTACGGCCATCTTCC 689046
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || || || | |||| ||| || || ||||| | ||||| || || |
Sbjct 689045 AGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 688986
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| ||| ||| | | || ||||| ||| ||||| || || || || | |||
Sbjct 688985 ATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTG 688926
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|||||||| || |||||| |||| ||||| ||||
Sbjct 688925 CCCGTCAGGGTCTTCACAGAGATCTGCATCTCTGC 688891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424914238589016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |