Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 318 5e-82
seq1832 192 5e-44
seq417 188 6e-43
seq2141 109 5e-19
seq158 89.7 4e-13
seq148 86.0 5e-12
>seq1020
Length=850931
Score = 318 bits (352), Expect = 5e-82
Identities = 598/876 (68%), Gaps = 11/876 (1%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| |||||| ||||| ||| || ||| ||||| || ||||| | |||||||| |||
Sbjct 339044 TGATATTCGCCTACTCTCTTCTCAAAG---TTAGTCTTCCCTTCCAGTGAAATATTCTCC 338988
Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAAT 4379
||||| ||||| ||||| | | || || || || | ||| | | | | |
Sbjct 338987 ATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATAAGT 338928
Query 4380 CGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTC 4439
||||| || || || || |||||||| |||| | | ||| || || ||||| | ||
Sbjct 338927 CGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAATGAGCTTC 338868
Query 4440 ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCT 4499
||||| | || | || | ||||| || ||||| ||||| | | ||||| ||
Sbjct 338867 ACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCATTAATAATTATTTCC 338808
Query 4500 TTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCA 4559
|| | | | | | || ||||| | || | || | |||| | || ||||| |||
Sbjct 338807 TTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTCA 338748
Query 4560 CAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAA 4619
|| || ||||| || ||||||||| | ||||| || ||||| | | || ||||| |
Sbjct 338747 CAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCCAGGCATCAGG 338688
Query 4620 CCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACG 4679
|| | || || ||||| ||||| | ||||| || |||||||||| || ||||| ||
Sbjct 338687 CCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGATTCCTTCCACA 338628
Query 4680 GCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAAT 4739
|| ||||| || || | || |||| | | | ||||||| | |||| | ||
Sbjct 338627 GCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGTCCAATGCAAG 338568
Query 4740 GCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTA 4796
||||| | || || ||||| || || || ||||| | || ||||| || | |||
Sbjct 338567 GCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAAGAGAAATTCC 338508
Query 4797 CTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855
|||| || ||| |||| |||||||||||| | || || || ||||| ||||||||
Sbjct 338507 CTTTCTT----TGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTCAGAATG 338452
Query 4856 TATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| ||||| || |||| || || | || || || | |||||||| | ||||||||
Sbjct 338451 GATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 338392
Query 4916 GTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGC 4975
| | ||| | || || |||||||| ||||| || || ||||| |||||||| || ||
Sbjct 338391 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAAGAAAGC 338332
Query 4976 CAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATC 5035
|| ||| || ||||||||||| || |||||||| || || |||||| | | ||
Sbjct 338331 CAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGCTGAATGTC 338272
Query 5036 TTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGA 5095
|| | | ||| || | |||| | |||||||| || || || ||||| || ||| |
Sbjct 338271 CTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACCTCTG 338212
Query 5096 CCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|||||||||| |||| || || | ||||||||
Sbjct 338211 CCAAATATCACAGTACTCGATGGGGAAGATGACAAA 338176
>seq1832
Length=302895
Score = 192 bits (212), Expect = 5e-44
Identities = 575/875 (66%), Gaps = 27/875 (3%)
Strand=Plus/Plus
Query 4273 CTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACG 4332
||| ||| || |||| ||||| || ||||| | |||||||| ||||||| ||||| |
Sbjct 206478 CTCTCTTCTCAAAGAGGTTAGTCTTCCCTTCCAGTGAAATATTCTCCATAAGGTCAAATG 206537
Query 4333 GATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGC-TAC--AAGCAATCGGTCAGCTA 4389
|||| | | || || || | | ||| | | | ||| || ||| || |
Sbjct 206538 GATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTGCCTAAG---TCAGTCTGCCA 206594
Query 4390 CAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCG 4449
||||| |||||||| | || | ||| || || ||||| | ||| || | |
Sbjct 206595 TGAATTCAATATACTGCTTTATTAACATGCAATTCATCCCAATGAGCTTCAGCGGCAAGG 206654
Query 4450 CGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTAT 4509
| | || | ||||| || ||||| | ||||||| | ||||| || || | | | |
Sbjct 206655 CCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCTTTGATAATTATTTCCTTCACTCTCT 206714
Query 4510 CTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAAC 4569
| || ||||||| || | || | |||| | | ||||| |||| || ||||
Sbjct 206715 GCTCTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGTAGGCAAAGTCACGGTGTAAAC 206774
Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAAC-GTTAATCCGGGCATTAAACCTCTCTTT 4628
| || ||||||||||| || || || |||||| || | || ||||| | | | ||
Sbjct 206775 CCTCATCTCTGCTAATAAGCTCATTGGAAAACAGTGAGGCCAGGCATCAGGCTGCATTTC 206834
Query 4629 TTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688
|| ||||| |||| ||| | || ||| ||||| | || ||||| ||| |||||
Sbjct 206835 TTGAGCCAGTATATCAACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAG 206894
Query 4689 GCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTT 4747
| || | | |||| | | ||| ||||||| || ||| | || ||||| ||
Sbjct 206895 TCCACAACCCATTCCCCGTAGGTAGCCT-CTTTGTCCCCAACCCAATGCAAGGCCCAATT 206953
Query 4748 AGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTC 4804
|| || ||| | | || || ||||| | || | ||| || | ||| || | ||
Sbjct 206954 TGCCTTCTTCCTTCCACAAGGCATTGTCTCCATGGTGTTGAAGAGAAATTCCCTCTCTT- 207012
Query 4805 AAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTT 4863
||| |||| ||||||||||| | || || ||| |||| |||||||| || ||||
Sbjct 207013 ---TGGAATCTT--ATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTT 207067
Query 4864 CTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAA 4923
| || ||||| || || || || || || | |||||||| | ||||| || | | |
Sbjct 207068 CCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTGAACCTCTTGGCCAC 207127
Query 4924 ATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACAT 4983
| | || || |||||||| |||||||| || |||| || |||| || |||| ||| |
Sbjct 207128 ACCACTCCACCAAGTTTTCATTTACTATGCCAACACTTGCCACAAAGAAAGCCAGAACGT 207187
Query 4984 GA------GATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCT 5036
|| | |||||| | || | || |||||||| || || |||||| | | ||
Sbjct 207188 GAACGTGGGGTATAAAAT-CTCTCTCCTCAGGCTTCAGGGATTCCCAGTGCTGAATGTCC 207246
Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096
|| | | || || |||| | | |||||||| || || || ||||| || |||| |
Sbjct 207247 TTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAGAAGCCTCAGCTTTCTTACACATCTGC 207306
Query 5097 CAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|||| |||| |||||| || || | |||| |||
Sbjct 207307 CAAAGATCATGATACTCCATAGGGAAGATGAGAAA 207341
>seq417
Length=2207251
Score = 188 bits (208), Expect = 6e-43
Identities = 457/687 (67%), Gaps = 9/687 (1%)
Strand=Plus/Plus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || ||| ||||| ||| | ||||| ||||| || ||||| | |||||||| |||
Sbjct 863680 TGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCC 863739
Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAAT 4379
||| | ||||| ||||| | | | || || || | ||| | | | | |
Sbjct 863740 ATATAGTCAAATGGATTTTCTACTCCGAAAACCTTGCCAAAACCTAGCTCCAGCATAAGT 863799
Query 4380 CGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTC 4439
||||| || || || || |||||||| |||| | ||| || || ||||| || ||
Sbjct 863800 CGGTCTGCCACGAACTCAATATACTGCTTCATTAACATGCAATTCATCCCAATGAACTTC 863859
Query 4440 ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCT 4499
| || | || | | | || | || ||||| ||||| | | ||||| ||
Sbjct 863860 ATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCATTAATAATTATTTCC 863919
Query 4500 TTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCA 4559
|| | | | | || ||||| | || | || | |||| | || ||||| |||
Sbjct 863920 TTCACTCCCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTCA 863979
Query 4560 CAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAA 4619
|| || ||||| || ||||||||||| ||||| || |||||||| | || ||||| |
Sbjct 863980 CAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGG 864039
Query 4620 CCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACG 4679
| | || || ||||| ||||| | |||| || ||||||||||| || ||||| ||
Sbjct 864040 CTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAGATTCCTTCCACA 864099
Query 4680 GCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAA 4738
|| ||||| | || | || |||| | | ||| ||||||| ||||| ||
Sbjct 864100 GCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGC-CTCTTTGTCCCCGATCCAACGCAA 864158
Query 4739 TGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTT 4795
|||||| || | ||||| || || || ||||| | || ||||| || ||||
Sbjct 864159 GGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTGAAGAGAAATTC 864218
Query 4796 ACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855
|||| ||| | |||| ||| |||||||| || || || |||||||| ||||||||
Sbjct 864219 CCTTTCTTC---GGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATCTCAGAATG 864275
Query 4856 TATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| ||||| || | ||| || || || || || || | |||||||| | ||||||||
Sbjct 864276 AATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 864335
Query 4916 GTTACAAAATCTTTCTACTAAGTTTTC 4942
|| | || | || || ||||||||
Sbjct 864336 -TTGCTTAACCGCTCCACCAAGTTTTC 864361
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 4932 ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATA 4991
|| ||| |||| ||||| || ||| |||| | ||||| || |||| |||||| ||||||
Sbjct 864546 ACCAAGCTTTCATTTACCATGCCGGCACTCGGCGCAAAGAAAGCCAGAACATGGGATATA 864605
Query 4992 AAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACT 5051
||||| || |||||||| || || || | | | || || | | ||| |||
Sbjct 864606 AAGTATCTCTCCTCAGGCTTCAGGGATTCCCGCGGCTGAATGTCCTTGGAAAGATCCACT 864665
Query 5052 TCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATAC 5111
|||||| | |||||||| || || || ||||| || ||||| |||||||||| | |||
Sbjct 864666 TCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATATCATGGTAC 864725
Query 5112 TGAATCGGAAGTATGACAAA 5131
| || || | ||||||||
Sbjct 864726 TCGATAGGGAAGATGACAAA 864745
>seq2141
Length=56954
Score = 109 bits (120), Expect = 5e-19
Identities = 160/223 (72%), Gaps = 9/223 (4%)
Strand=Plus/Minus
Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAG- 31823
||| || || ||||| || ||||| | || | ||||| |||||||| ||| || |||
Sbjct 38917 AGCCCTTGTGAAAACGGACATTCAGGTAGCTCTTCCTTCTGGGTGCTATGGAAGAGTAGT 38858
Query 31824 --CTCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGA 31881
|||| | ||||| ||||| | |||||||| ||||| | || || || || |||||
Sbjct 38857 AGCTCCCCGTTCTGGCTTGGCTGCAAAACACTTCATCGATATAGGAGCTGGCGTCATAGA 38798
Query 31882 TTCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATA 31938
| |||||| |||||||| || || | || | ||||||||||| ||| || | |
Sbjct 38797 TGAAGACTACAGAGGAAATGTGGGTGTCGTACTATTTAATTTTGGCAAAGAGAAGT--TT 38740
Query 31939 CAGTATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981
|| | |||||||||||| || | || || || ||||| |||
Sbjct 38739 CA-AGTCAAAAAGGGCGATCGGATTGCACAGCTCATTTGTGAA 38698
>seq158
Length=7371824
Score = 89.7 bits (98), Expect = 4e-13
Identities = 98/130 (75%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
|||||||| || || ||||| || || || || ||||||||||||||||| || || |
Sbjct 3458705 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATA 3458649
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||| ||||| |||| || || | ||||| || |||||||| || | ||| || |
Sbjct 3458648 TGTGAGAGATAAAATACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 3458589
Query 5041 TTAAATCAAC 5050
||| |||||
Sbjct 3458588 ATAAGTCAAC 3458579
>seq148
Length=4816872
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || ||||| || | || ||||| | || | || ||
Sbjct 2362151 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 2362210
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||
Sbjct 2362211 AGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 2362270
Query 4692 AC 4693
||
Sbjct 2362271 AC 2362272
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| |||||||||||| || || || || ||||| |||||||| || ||||| || |||
Sbjct 2364181 TCTTTAATATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTCCATGGCA 2364240
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| || || || || || || | |||||||| | ||||||||
Sbjct 2364241 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 2364284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427029338231369
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