Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq537 156 3e-33
>seq537
Length=2461945
Score = 156 bits (172), Expect = 3e-33
Identities = 133/164 (81%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||| ||| || |||||||| ||||| |||| ||||||||||||||| |||||
Sbjct 243277 AGGCCTGTGATGTGCGCGATCATGTAGGTGAGCAGAGCGTAGCTGGCGATGTTGAAGGGC 243336
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||||||||||||||||||||| |||||||| || ||||| || |
Sbjct 243337 ACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 243396
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
||||| ||||| || | ||| ||||||||||| || ||||| ||
Sbjct 243397 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 243440
Score = 91.5 bits (100), Expect = 1e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 27497 TGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 27556
|||| ||||| || ||||||||||| || || || || || || || | || || ||||
Sbjct 245827 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 245886
Query 27557 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616
| |||| ||| ||| ||||||| ||||||| || || ||||| |||||||| |
Sbjct 245887 CTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTT 245946
Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
| || ||||| || || || |||| |||||| || ||
Sbjct 245947 TCACTCCCTTGGAAGACAGTTCCTTGGCGTTTGTAGATCC 245986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369489668384483
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |