Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq314 93.3 4e-14
seq85 87.8 2e-12
>seq314
Length=2398313
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || |||| ||||| ||||| ||| | || || |||||
Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218
|| || ||| | || ||| ||||| ||||| || ||| | |||| | || ||
Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 2323530
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|| | || |||| |||||||||||| |||||||| ||| || | || |||||
Sbjct 2323529 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 2323470
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
||| || ||||| || || || || || ||| | || || || |||||||
Sbjct 2323469 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGGCA 2323420
>seq85
Length=4131313
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || |||| ||||| ||||| ||| | || || |||||
Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218
|| || ||| | || ||| ||||| ||||| || ||| | |||| | || ||
Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 1818292
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|| | || |||| |||||||||||| |||||||| ||| || | || |||||
Sbjct 1818291 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 1818232
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
||| || ||||| || || || || || ||| | || || | |||||||
Sbjct 1818231 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCTGGGGTGGCA 1818182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421791186772168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |