Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq314 93.3 4e-14 seq85 87.8 2e-12 >seq314 Length=2398313 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || |||| ||||| ||||| ||| | || || ||||| Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218 || || ||| | || ||| ||||| ||||| || ||| | |||| | || || Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 2323530 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | || |||| |||||||||||| |||||||| ||| || | || ||||| Sbjct 2323529 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 2323470 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||| || ||||| || || || || || ||| | || || || ||||||| Sbjct 2323469 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGGCA 2323420 >seq85 Length=4131313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || |||| ||||| ||||| ||| | || || ||||| Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCA 111218 || || ||| | || ||| ||||| ||||| || ||| | |||| | || || Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 1818292 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | || |||| |||||||||||| |||||||| ||| || | || ||||| Sbjct 1818291 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 1818232 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||| || ||||| || || || || || ||| | || || | ||||||| Sbjct 1818231 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCTGGGGTGGCA 1818182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421791186772168