Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1020 181 1e-40 seq417 145 8e-30 seq1832 109 6e-19 seq522 89.7 5e-13 seq356 86.0 7e-12 seq53 86.0 7e-12 seq1214 82.4 8e-11 seq156 82.4 8e-11 >seq1020 Length=850931 Score = 181 bits (200), Expect = 1e-40 Identities = 375/558 (67%), Gaps = 0/558 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| || ||||| || ||| | | |||||| ||||| | | Sbjct 338759 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGG 338700 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | || ||||| || | ||| ||||| | ||||| || || ||||||| Sbjct 338699 CCAGGCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGG 338640 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || ||||| ||||| ||||||| ||| || | || | | | || | Sbjct 338639 ATTCCTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCA 338580 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 |||| | | ||||| |||||| |||||||| ||||| || || || || Sbjct 338579 GTCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTG 338520 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| |||||| |||| | ||||| || ||| | || | ||| ||||| Sbjct 338519 AAGAGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATC 338460 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||||| || ||||| || |||| || || |||| ||||| | ||||| | | Sbjct 338459 TCAGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATC 338400 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| || | ||| | | | || ||||| || || || |||||||| || ||| Sbjct 338399 TGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCA 338340 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 |||||||| ||||| | |||||| | ||| || |||| | || ||| | Sbjct 338339 AAGAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGC 338280 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 | ||| || || || | ||| || | ||| |||||||||| ||| || |||| Sbjct 338279 TGAATGTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 338220 Query 24049 TACATTAGCCAAATATCA 24066 ||| | ||||||||||| Sbjct 338219 TACCTCTGCCAAATATCA 338202 >seq417 Length=2207251 Score = 145 bits (160), Expect = 8e-30 Identities = 244/353 (69%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| || ||||| || ||||| | |||||| ||||| || | Sbjct 863968 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGG 864027 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | | ||||| || | ||| ||||| | |||| || || |||||||| Sbjct 864028 CCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAG 864087 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || ||||| |||||| |||||| ||| || | || || | | || Sbjct 864088 ATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCG 864147 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||| |||| | |||||||| ||||| || || || || Sbjct 864148 ATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTG 864207 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| ||||||| |||| | || || || ||||| || | ||||||||| Sbjct 864208 AAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATC 864267 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861 ||||||||||| ||||| || | ||| || || ||||| ||||| | ||||| Sbjct 864268 TCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTC 864320 >seq1832 Length=302895 Score = 109 bits (120), Expect = 6e-19 Identities = 366/566 (65%), Gaps = 9/566 (2%) Strand=Plus/Plus Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT-GTTAATCC 23570 ||||| |||| |||| || ||||| || ||||| | ||||| ||||| || | || Sbjct 206756 GCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACAGTGAGGCC 206815 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 ||||| | | | ||| || | ||| |||| ||| | || || ||||| | || Sbjct 206816 AGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGAAGAACCAAAAAAGGAGAT 206875 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAAT 23690 || || || |||||| |||||| | | || | || || | | || || Sbjct 206876 TCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAAC 206935 Query 23691 CCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750 ||| | | |||||| |||||| || |||| ||||| || || | || || Sbjct 206936 CCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCATTGTCTCCATGGTGTTGAA 206995 Query 23751 GAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTC 23810 |||||| | |||| |||| |||||| || ||| | || | |||| |||| || Sbjct 206996 GAGAAATTCCCTCTCTTTGGAATCT--TATATAAGTGTCAGTGAGGAGACTACACATCTC 207053 Query 23811 AGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTG 23870 |||||| || ||||| || ||||| || || ||||| ||||| | ||||| | || || Sbjct 207054 AGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTG 207113 Query 23871 AACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAA 23930 ||| || | | | | | | || ||||| || || || ||| |||| || |||| Sbjct 207114 AACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTATGCCAACACTTGCCACAAA 207173 Query 23931 GAAAGCAAGAACAT--ATTT----TATAAAATGTCTTTCATCAGTTGATAATTTTTTCCA 23984 |||||| ||||| | | | |||||||| ||| || |||| | || ||| Sbjct 207174 GAAAGCCAGAACGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCAGGGATTCCCA 207233 Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044 | | ||| || || || | || || || | | ||||||||||| ||| || Sbjct 207234 GTGCTGAATGTCCTTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAGAAGCCTCAGCTTT 207293 Query 24045 CTTATACATTAGCCAAATATCATTAT 24070 |||| |||| |||||| ||||| || Sbjct 207294 CTTACACATCTGCCAAAGATCATGAT 207319 >seq522 Length=2912698 Score = 89.7 bits (98), Expect = 5e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 ||||||||| |||| ||||||| |||||||| |||||| || | ||||||| ||||||| Sbjct 2626810 GAACTCCTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCCGAAGGAGCTGGGACTACAGGC 2626751 Query 8597 ATGAGCCACCGCGCCTGGC 8615 | | ||||||||||| ||| Sbjct 2626750 ACGTGCCACCGCGCCCGGC 2626732 >seq356 Length=3100747 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct 866805 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 866746 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 866745 CGCCACCGCGCC 866734 >seq53 Length=5910346 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||||||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 2674785 CTCCCGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 2674844 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 2674845 CGCCACCGCGCC 2674856 >seq1214 Length=777808 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||| Sbjct 495682 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCG 495741 Query 8465 AGCCACCACGCCAAGCTA 8482 |||||||| || ||||| Sbjct 495742 CGCCACCACACCCAGCTA 495759 >seq156 Length=2949338 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596 ||||||||| |||| | ||||| |||||||| ||||||| | ||||||| ||||||| Sbjct 64385 GAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGC 64444 Query 8597 ATGAGCCACCGCGCCTGGCC 8616 || ||||||||||||||| Sbjct 64445 GTGCCCCACCGCGCCTGGCC 64464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521462623090200