Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 181 1e-40
seq417 145 8e-30
seq1832 109 6e-19
seq522 89.7 5e-13
seq356 86.0 7e-12
seq53 86.0 7e-12
seq1214 82.4 8e-11
seq156 82.4 8e-11
>seq1020
Length=850931
Score = 181 bits (200), Expect = 1e-40
Identities = 375/558 (67%), Gaps = 0/558 (0%)
Strand=Plus/Minus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||||| ||||| |||| || ||||| || ||| | | |||||| ||||| | |
Sbjct 338759 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGG 338700
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| ||||| | || ||||| || | ||| ||||| | ||||| || || |||||||
Sbjct 338699 CCAGGCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGG 338640
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| || || ||||| ||||| ||||||| ||| || | || | | | || |
Sbjct 338639 ATTCCTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCA 338580
Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748
|||| | | ||||| |||||| |||||||| ||||| || || || ||
Sbjct 338579 GTCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTG 338520
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|||||||| |||||| |||| | ||||| || ||| | || | ||| |||||
Sbjct 338519 AAGAGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATC 338460
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868
|||||||| || ||||| || |||| || || |||| ||||| | ||||| | |
Sbjct 338459 TCAGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATC 338400
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
||||| || | ||| | | | || ||||| || || || |||||||| || |||
Sbjct 338399 TGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCA 338340
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988
|||||||| ||||| | |||||| | ||| || |||| | || ||| |
Sbjct 338339 AAGAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGC 338280
Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048
| ||| || || || | ||| || | ||| |||||||||| ||| || ||||
Sbjct 338279 TGAATGTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 338220
Query 24049 TACATTAGCCAAATATCA 24066
||| | |||||||||||
Sbjct 338219 TACCTCTGCCAAATATCA 338202
>seq417
Length=2207251
Score = 145 bits (160), Expect = 8e-30
Identities = 244/353 (69%), Gaps = 0/353 (0%)
Strand=Plus/Plus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||||| ||||| |||| || ||||| || ||||| | |||||| ||||| || |
Sbjct 863968 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGG 864027
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| ||||| | | ||||| || | ||| ||||| | |||| || || ||||||||
Sbjct 864028 CCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAG 864087
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| || || ||||| |||||| |||||| ||| || | || || | | ||
Sbjct 864088 ATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCG 864147
Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748
||||| | ||| |||| | |||||||| ||||| || || || ||
Sbjct 864148 ATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTG 864207
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|||||||| ||||||| |||| | || || || ||||| || | |||||||||
Sbjct 864208 AAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATC 864267
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861
||||||||||| ||||| || | ||| || || ||||| ||||| | |||||
Sbjct 864268 TCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTC 864320
>seq1832
Length=302895
Score = 109 bits (120), Expect = 6e-19
Identities = 366/566 (65%), Gaps = 9/566 (2%)
Strand=Plus/Plus
Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT-GTTAATCC 23570
||||| |||| |||| || ||||| || ||||| | ||||| ||||| || | ||
Sbjct 206756 GCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACAGTGAGGCC 206815
Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630
||||| | | | ||| || | ||| |||| ||| | || || ||||| | ||
Sbjct 206816 AGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGAAGAACCAAAAAAGGAGAT 206875
Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAAT 23690
|| || || |||||| |||||| | | || | || || | | || ||
Sbjct 206876 TCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAAC 206935
Query 23691 CCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750
||| | | |||||| |||||| || |||| ||||| || || | || ||
Sbjct 206936 CCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCATTGTCTCCATGGTGTTGAA 206995
Query 23751 GAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTC 23810
|||||| | |||| |||| |||||| || ||| | || | |||| |||| ||
Sbjct 206996 GAGAAATTCCCTCTCTTTGGAATCT--TATATAAGTGTCAGTGAGGAGACTACACATCTC 207053
Query 23811 AGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTG 23870
|||||| || ||||| || ||||| || || ||||| ||||| | ||||| | || ||
Sbjct 207054 AGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTG 207113
Query 23871 AACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAA 23930
||| || | | | | | | || ||||| || || || ||| |||| || ||||
Sbjct 207114 AACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTATGCCAACACTTGCCACAAA 207173
Query 23931 GAAAGCAAGAACAT--ATTT----TATAAAATGTCTTTCATCAGTTGATAATTTTTTCCA 23984
|||||| ||||| | | | |||||||| ||| || |||| | || |||
Sbjct 207174 GAAAGCCAGAACGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCAGGGATTCCCA 207233
Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044
| | ||| || || || | || || || | | ||||||||||| ||| ||
Sbjct 207234 GTGCTGAATGTCCTTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAGAAGCCTCAGCTTT 207293
Query 24045 CTTATACATTAGCCAAATATCATTAT 24070
|||| |||| |||||| ||||| ||
Sbjct 207294 CTTACACATCTGCCAAAGATCATGAT 207319
>seq522
Length=2912698
Score = 89.7 bits (98), Expect = 5e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
||||||||| |||| ||||||| |||||||| |||||| || | ||||||| |||||||
Sbjct 2626810 GAACTCCTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCCGAAGGAGCTGGGACTACAGGC 2626751
Query 8597 ATGAGCCACCGCGCCTGGC 8615
| | ||||||||||| |||
Sbjct 2626750 ACGTGCCACCGCGCCCGGC 2626732
>seq356
Length=3100747
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 866805 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCG 866746
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 866745 CGCCACCGCGCC 866734
>seq53
Length=5910346
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||||||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 2674785 CTCCCGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 2674844
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 2674845 CGCCACCGCGCC 2674856
>seq1214
Length=777808
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||
Sbjct 495682 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCG 495741
Query 8465 AGCCACCACGCCAAGCTA 8482
|||||||| || |||||
Sbjct 495742 CGCCACCACACCCAGCTA 495759
>seq156
Length=2949338
Score = 82.4 bits (90), Expect = 8e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
||||||||| |||| | ||||| |||||||| ||||||| | ||||||| |||||||
Sbjct 64385 GAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGC 64444
Query 8597 ATGAGCCACCGCGCCTGGCC 8616
|| |||||||||||||||
Sbjct 64445 GTGCCCCACCGCGCCTGGCC 64464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521462623090200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |