Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq265 170 3e-37 seq565 131 2e-25 >seq265 Length=2706884 Score = 170 bits (188), Expect = 3e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||| || |||| ||| ||| |||||||| || ||||| || ||||||||||| Sbjct 499881 GTCTGGAATAGCCGCTCATCATCCCACTCTGGATGCTCCTGTTTAAGCACATCGCACACT 499822 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||||||||||| ||||| || |||||||||||||| || ||||| ||||| || || Sbjct 499821 CTGTTGTGTTCCCGTAGCCAAATTGTGGCGTACATCATCAGACCAGGCACCAGCCCGAAG 499762 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 | || || || ||||| | || | || ||| || || | ||| || |||||||| | | Sbjct 499761 ACTTCCTGGCCCACAGCAAACCGTAGGTGTTCAGGAACATGGGGTGGGTAGATCATCTCC 499702 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479 ||||| |||||||| | ||| ||||||| || || ||||| Sbjct 499701 ACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAAT 499658 Score = 156 bits (172), Expect = 6e-33 Identities = 217/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342 |||| | ||| || | || ||||| ||||| ||||| | |||| ||||||||||| | Sbjct 501304 GAACACTGAATGCAGTAAAAGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTG 501245 Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402 || | |||| ||| || || || ||||| || || ||||| ||||||||||| Sbjct 501244 AGGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGT 501185 Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462 | ||||| |||||| || |||| || ||||| | |||||| || || |||| || | Sbjct 501184 CAGGGGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGCGCTCCCATTTCTA 501125 Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522 ||| ||||||| |||||||| | ||||| |||||||| | || || | | |||| Sbjct 501124 CCATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTAGCAGGAGGGCAGGATACA 501065 Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582 | |||| || || | || || ||||||||| | | ||||| || ||||| |||| Sbjct 501064 GTTCCATGGCATCAATATCACCATAAAGGGCCTCTAACCCCGCAGCCATTTCCTTCTCTC 501005 Query 8583 CTGT 8586 |||| Sbjct 501004 CTGT 501001 Score = 131 bits (144), Expect = 2e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | || Sbjct 498820 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 498761 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||| || || ||||| || ||| |||| || |||||||| | || |||||||||||||| Sbjct 498760 AAATTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 498701 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828 ||| |||| | || | |||||| ||||||||||| | | | ||| || |||| Sbjct 498700 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTTGAATCAGGAAGCTC 498641 Query 9829 TGTTTTACCTGGTGAACGAGAA 9850 | | || |||| || ||||| Sbjct 498640 TTTCTTGCCTGAAAAATGAGAA 498619 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | || |||||||| || | || || || || ||| || | | Sbjct 498227 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGCCACAGGGGGAAGAGCTCTGGTG 498168 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 || ||||||||||||||||| |||||||||||| || | |||||| ||||||| | Sbjct 498167 TAGTAGGAGAGATTGGAGAAGGCTTCCCAGCTTTTATAGCCATAGTCCACGTTGTAAGTT 498108 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || || || |||||||||| || || |||| Sbjct 498107 GGTGGACTCTCAATCAAATGTGACCTGGCTGA 498076 >seq565 Length=1946861 Score = 131 bits (144), Expect = 2e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 ||||||| || ||| |||| || || || || ||||| || ||||||||| | || | Sbjct 1920289 TCTTGACCATATTGAAGCCCATCTCACCACCAAATGTGCTCGGTTTCCAGTACTCTGGAG 1920230 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 |||||||| ||| | | |||||| |||||||| || |||||||| | || | || | Sbjct 1920229 AGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 1920170 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 |||| || ||||||| ||| ||| || ||| |||| | | || | ||| | ||||| Sbjct 1920169 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCCAGAAGCAGCCCCGGGTAGAACTCCA 1920110 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 || |||| |||||| || || || | ||||| ||||||||||| || |||| Sbjct 1920109 AGGCATCGATGTCTCCATACAGCTCCTCCAACTCGGCTGCGATCTCCTTCTCCCCTG 1920053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716841914982720