Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq47 140 3e-28 seq1114 102 8e-17 seq1198 98.7 9e-16 seq949 98.7 9e-16 seq1835 95.1 1e-14 >seq47 Length=4803410 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| || Sbjct 4289655 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289714 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| ||||| || |||| | ||| ||||| | ||| | || |||||||||| | Sbjct 4289715 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 4289774 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 4289775 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 4289834 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| ||||| ||||| ||||||||| Sbjct 4289835 CCGGTCAAGGTCTTCACGAAGATCTGCATG 4289864 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| || Sbjct 4289427 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289486 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || ||||| || |||| | ||| ||||| | ||| | || |||||||||| | Sbjct 4289487 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 4289546 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || || Sbjct 4289547 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTG 4289606 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| ||||| ||||| ||||||||| Sbjct 4289607 CCGGTCAAGGTCTTCACGAAGATCTGCATG 4289636 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| || Sbjct 4289883 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289942 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| ||||| || |||| | ||| ||||| | ||| | || ||| |||||| | Sbjct 4289943 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 4290002 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || ||| Sbjct 4290003 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 4290062 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| || || |||||||| Sbjct 4290063 CCGGTCAAGGTCTTCACAAAGATCTGCAT 4290091 >seq1114 Length=1661397 Score = 102 bits (112), Expect = 8e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||| ||||| ||||| || || || || ||||| Sbjct 1502911 AGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 1502970 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || || || | ||| ||||| | ||| | || ||| Sbjct 1502971 CCATCTTCCAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCT 1503030 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGACTCCACCTCCACCGT 41823 || || ||| || |||| ||| || || || || | ||||||||||| || Sbjct 1503031 TTATCTTGGATCTTCGCCTTC-ACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGT 1503089 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| ||||| ||||| ||||||||| Sbjct 1503090 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1503129 >seq1198 Length=804178 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| || || || ||| ||||| || || || || Sbjct 573943 ACAGCCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATC 573884 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || ||||||||||| || || || || | ||| ||||| | Sbjct 573883 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 573824 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGACT 41810 ||| | || ||| || || ||| || |||| ||| || ||||| || | || Sbjct 573823 GGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC-ACGTTTTCAGTGGTGTCACTGGGCT 573765 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||| || || || || || || || ||||| ||||| ||||||||| Sbjct 573764 CCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATG 573712 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| |||||||| || || || ||| | | || || Sbjct 573693 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGTGGCCATCTTCC 573634 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || || || || | Sbjct 573633 AGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTGTTTATCTTGG 573574 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | ||||| || | ||| ||||| | | || || || Sbjct 573573 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACCTCTAGGTTGATGGTCTTG 573514 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| ||||| |||||||| || Sbjct 573513 CCGGTCAGGGTCTTCACGAAGATCTGCATTTT 573482 >seq949 Length=596474 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| || || || ||| ||||| ||||| || || Sbjct 262150 ACAGCCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATC 262209 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || || ||||||||||| || || || || | ||| ||||| | Sbjct 262210 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 262269 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||| | || ||| || || ||| || ||||| | ||||| || | ||| Sbjct 262270 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTC 262329 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| || || || || || ||||| ||||| || || |||||||| || Sbjct 262330 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 262383 >seq1835 Length=364085 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| | ||| ||| |||||||| ||||| ||| | || ||||||||| | || | Sbjct 341238 ACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTAGGCAGACAGGGTGCGCCCATCTGCC 341297 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| | | ||| || |||| | ||| ||||| | ||| | || || |||||| | Sbjct 341298 AGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCATCTTTGTCCTGG 341357 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| || || || ||| Sbjct 341358 ATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 341417 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| ||||| ||||| ||||||||| Sbjct 341418 CCAGTCAAGGTCTTCACGAAGATCTGCATG 341447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462281503131600