Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq47 140 3e-28
seq1114 102 8e-17
seq1198 98.7 9e-16
seq949 98.7 9e-16
seq1835 95.1 1e-14
>seq47
Length=4803410
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| ||
Sbjct 4289655 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289714
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| ||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 4289715 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 4289774
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || ||
Sbjct 4289775 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 4289834
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| ||||| ||||| |||||||||
Sbjct 4289835 CCGGTCAAGGTCTTCACGAAGATCTGCATG 4289864
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| ||
Sbjct 4289427 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289486
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| || ||||| || |||| | ||| ||||| | ||| | || |||||||||| |
Sbjct 4289487 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 4289546
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || ||
Sbjct 4289547 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTG 4289606
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| ||||| ||||| |||||||||
Sbjct 4289607 CCGGTCAAGGTCTTCACGAAGATCTGCATG 4289636
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| |||| ||
Sbjct 4289883 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289942
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| ||||| || |||| | ||| ||||| | ||| | || ||| |||||| |
Sbjct 4289943 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 4290002
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 4290003 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 4290062
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| ||||| || || ||||||||
Sbjct 4290063 CCGGTCAAGGTCTTCACAAAGATCTGCAT 4290091
>seq1114
Length=1661397
Score = 102 bits (112), Expect = 8e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| || || || ||| ||||| ||||| || || || || |||||
Sbjct 1502911 AGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 1502970
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || || || | ||| ||||| | ||| | || |||
Sbjct 1502971 CCATCTTCCAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCT 1503030
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGACTCCACCTCCACCGT 41823
|| || ||| || |||| ||| || || || || | ||||||||||| ||
Sbjct 1503031 TTATCTTGGATCTTCGCCTTC-ACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGT 1503089
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || ||||| ||||| ||||| |||||||||
Sbjct 1503090 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1503129
>seq1198
Length=804178
Score = 98.7 bits (108), Expect = 9e-16
Identities = 163/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
|| ||| || | ||||| | ||||| || || || ||| ||||| || || || ||
Sbjct 573943 ACAGCCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATC 573884
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| | || || ||||||||||| || || || || | ||| ||||| |
Sbjct 573883 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 573824
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGACT 41810
||| | || ||| || || ||| || |||| ||| || ||||| || | ||
Sbjct 573823 GGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC-ACGTTTTCAGTGGTGTCACTGGGCT 573765
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||||| || || || || || || || ||||| ||||| |||||||||
Sbjct 573764 CCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATG 573712
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| || ||| ||||| |||||||| || || || ||| | | || ||
Sbjct 573693 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGTGGCCATCTTCC 573634
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | ||| | || || || || |
Sbjct 573633 AGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTGTTTATCTTGG 573574
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||| ||||| | | || || ||
Sbjct 573573 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACCTCTAGGTTGATGGTCTTG 573514
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| ||||| ||||| ||||| |||||||| ||
Sbjct 573513 CCGGTCAGGGTCTTCACGAAGATCTGCATTTT 573482
>seq949
Length=596474
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
|| ||| || | ||||| | ||||| || || || ||| ||||| ||||| || ||
Sbjct 262150 ACAGCCACCCCTGAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATC 262209
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| | || || ||||||||||| || || || || | ||| ||||| |
Sbjct 262210 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 262269
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811
||| | || ||| || || ||| || ||||| | ||||| || | |||
Sbjct 262270 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTC 262329
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||||| || || || || || ||||| ||||| || || |||||||| ||
Sbjct 262330 CACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 262383
>seq1835
Length=364085
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| | ||| ||| |||||||| ||||| ||| | || ||||||||| | || |
Sbjct 341238 ACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTAGGCAGACAGGGTGCGCCCATCTGCC 341297
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| | | ||| || |||| | ||| ||||| | ||| | || || |||||| |
Sbjct 341298 AGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCATCTTTGTCCTGG 341357
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||| | | | ||||| || | ||||||||||| || || || |||
Sbjct 341358 ATCTTCACCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 341417
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| ||||| ||||| |||||||||
Sbjct 341418 CCAGTCAAGGTCTTCACGAAGATCTGCATG 341447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462281503131600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |