Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq780 91.5 3e-13
>seq780
Length=2502144
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||| || |||||||| ||||||||| | || || ||
Sbjct 1905846 GCATTTTTTGGAGCCCAGATGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 1905787
Query 52117 ATGGCCGCTTGTGGTCC-TATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || | || || | |||||||| ||||| ||||||||||| || || || ||
Sbjct 1905786 TTAGCTGCCTTCGGCCCGTGGATTCAGAAA-TATCTCTGGTGGAAACGATACCTGACCAT 1905728
Query 52176 AATGCAGTTGGT 52187
||||| ||||
Sbjct 1905727 GCTGCAGCTGGT 1905716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923000320641040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |