Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq11750 105 8e-18
>seq11750
Length=1640959
Score = 105 bits (116), Expect = 8e-18
Identities = 148/205 (72%), Gaps = 6/205 (3%)
Strand=Plus/Minus
Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559
|||||||| |||||| | ||||| || | ||| |||| ||||| ||||||||||| |||
Sbjct 1472059 TTAGGCTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCTCCAGGTTGCGGTAAGACA 1472000
Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAAT 164616
| |||||||| |||| |||| | || ||| | || || |||| | || ||
Sbjct 1471999 CTGTTGGCTCGACAGATTG-GCAAGATGTTGAATGCAAGAGAGCC--TAAAGTGGTCAAC 1471943
Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676
|| || ||| | | ||||||||||| || |||||||| ||||| || | || | |||
Sbjct 1471942 GGGCCAGAAATTCTCAACAAATATGTGGGAGAGTCAGAGGCTAACATTCGTAAACTCTTT 1471883
Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701
|| |||||||| || |||| ||
Sbjct 1471882 GCTGATGCTGAAGAGGAGCAAAGGA 1471858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595745183541600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |