Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq16993 187 4e-43 seq10239 178 2e-40 seq8532 159 5e-35 seq1836 152 8e-33 seq8205 143 4e-30 seq8713 109 9e-20 seq16205 107 3e-19 >seq16993 Length=658208 Score = 187 bits (206), Expect = 4e-43 Identities = 200/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||||||||||| | |||| || || || ||||| || || || |||||||||| Sbjct 130306 CGCTAAGCGTCATCGCAAAG-TCTTGCGGGACAATATCCAGGGTATTACTAAGCCAGCTA 130248 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||| | |||||||| ||||| ||| ||||||| | |||| ||||||| Sbjct 130247 TCCGGCGTCTTGCTAGGCGTGGTGGGGTCAAACGTATCTCTGGTCTTATCTACGAAGAGA 130188 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| || |||| | || || | | || |||| || || || |||||| | Sbjct 130187 CTCGTGGGGTGCTGAAAGTGTTTCTGGAAAATGTGATCCGGGACGCGGTCACCTATACGG 130128 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||| ||| ||||||| ||||||| || | |||||||| | Sbjct 130127 AGCACGCCAAGCGCAAGACTGTTACCGCCATGGACGTCGTCTACGCGCTCAAACGTCAGG 130068 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| |||| |||||||| Sbjct 130067 GCCGTACTCTTTACGGTTTTGG 130046 Score = 181 bits (200), Expect = 2e-41 Identities = 196/260 (75%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| ||||| | | ||| || ||||| ||||| || ||||| ||||| || || Sbjct 61821 GCTAAGCGCCATCGTAAAGTTCTCCGGGATAATATCCAGGGCATCACTAAGCCTGCCATT 61880 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| || |||||||| || ||||| ||||||| | ||||||| |||| | Sbjct 61881 CGTCGTCTGGCCCGCCGTGGTGGTGTTAAGCGGATCTCTGGGCTTATCTATGAGGAGACT 61940 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | || || ||| ||| |||| || || || ||| |||||| Sbjct 61941 CGCGGCGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGAG 62000 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| |||||||||||| |||||||| | ||||| || | || || || ||| Sbjct 62001 CACGCCAAACGCAAGACTGTCACCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAGGGC 62060 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | ||||||| || || Sbjct 62061 CGCACCCTTTATGGCTTCGG 62080 Score = 159 bits (176), Expect = 5e-35 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| ||| || || || ||||| || ||||||||||| || || Sbjct 182342 CGCTAAGCGCCACCGCAAGGTTCTGCGGGACAATATCCAGGGTATCACCAAGCCCGCCAT 182401 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||||||| ||||| || ||||| ||||||| | | || || |||| Sbjct 182402 CCGTCGCCTGGCTCGTCGCGGTGGTGTGAAGCGGATCTCTGGGCTCATTTACGAGGAGAC 182461 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||| | ||| ||| |||| || || || ||| ||||| Sbjct 182462 CCGCGGGGTGCTGAAGGTGTTCTTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 182521 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||| ||| |||||||| | ||||| || | || || || || Sbjct 182522 GCACGCCAAGCGGAAGACTGTTACCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAGGG 182581 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | |||||||| || Sbjct 182582 CCGCACCCTCTATGGTTTCGG 182602 Score = 158 bits (174), Expect = 2e-34 Identities = 198/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | ||| || || |||||||| || || || || || ||||| Sbjct 186316 CGCTAAGCGCCACCGTAAGGTTCTGCGCGACAACATCCAGGGCATAACTAAACCTGCTAT 186257 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||||||||| || || ||||| ||||||| | |||| ||||||| Sbjct 186256 CCGTCGCTTGGCTCGTCGTGGCGGTGTGAAGCGCATCTCTGGGCTCATCTACGAAGAGAC 186197 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||| | || || ||| || |||| ||||| || ||| ||||| Sbjct 186196 GCGCGGCGTCCTGAAAGTGTTTCTGGAGAATGTGATCCGGGATGCAGTCACCTACACCGA 186137 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || |||||||||||| | |||||| | ||||| || | || || || || Sbjct 186136 GCATGCCAAGCGGAAGACTGTCACCGCTATGGATGTGGTCTACGCTCTCAAGCGCCAGGG 186077 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 ||||| | || |||||||| ||||| ||| Sbjct 186076 CCGTACCCTCTACGGTTTTGGTGGTTAAGCTT 186045 Score = 154 bits (170), Expect = 2e-33 Identities = 195/268 (73%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| | | || || || ||||| || ||||| ||||| || || Sbjct 14575 CGCTAAGCGTCACCGCAAGGTTTTGCGCGACAATATCCAGGGCATCACAAAGCCGGCCAT 14634 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||| || ||||| ||||||||||| ||||||| | |||| || |||| Sbjct 14635 TCGCCGCCTGGCCCGCCGTGGAGGAGTCAAGCGCATCTCTGGCCTTATCTACGAGGAGAC 14694 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || ||||| | || || ||| ||| |||| || || || ||| ||||| Sbjct 14695 TCGCGGGGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 14754 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| | ||||| | || || || | || ||||| || Sbjct 14755 GCACGCCAAGCGCAAGACTGTCACCGCAATGGACGTGGTGTACGCGCTCAAGCGTCAGGG 14814 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | |||| || ||||| ||||| Sbjct 14815 CCGCACTCTTTACGGATTTGGTGGTTAA 14842 Score = 150 bits (166), Expect = 3e-32 Identities = 194/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| | | || || || ||||| || ||||| ||||| || || Sbjct 15467 CGCTAAGCGTCACCGCAAGGTTTTGCGCGACAATATCCAGGGCATCACAAAGCCGGCCAT 15526 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||| || ||||| ||||||||||| ||||||| | |||| || |||| Sbjct 15527 TCGCCGCCTGGCCCGCCGTGGAGGAGTCAAGCGCATCTCTGGCCTTATCTACGAGGAGAC 15586 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | || || ||| ||| |||| || || || ||| ||||| Sbjct 15587 CCGCGGGGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 15646 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| | ||||| | ||||| || | || ||||| || Sbjct 15647 GCACGCCAAGCGCAAGACTGTCACCGCAATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 15706 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || ||||| ||||| Sbjct 15707 CCGCACTCTCTACGGATTTGGTGGTTAA 15734 Score = 141 bits (156), Expect = 1e-29 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | ||| || || |||||||| || || || ||||| || || Sbjct 20704 CGCTAAGCGCCACCGGAAGGTTCTGCGGGACAACATCCAGGGCATTACTAAGCCGGCCAT 20645 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||||||||| ||||| || ||||| ||||||| | |||| || |||| Sbjct 20644 TCGCCGTTTGGCTCGTCGCGGTGGTGTGAAGCGCATCTCTGGGCTCATCTACGAGGAGAC 20585 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || ||||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 20584 TCGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACGGA 20525 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | || || || | || || ||||| Sbjct 20524 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTGTACGCGCTCAAGCGCCAAGG 20465 Query 16672 CCG 16674 || Sbjct 20464 ACG 20462 >seq10239 Length=96211 Score = 178 bits (196), Expect = 2e-40 Identities = 200/268 (75%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| |||||| ||||||||||| || ||||||||||| || || Sbjct 93150 CGCTAAGCGTCACCGCAAGGTTCTTCGCGATAACATCCAGGGCATCACCAAGCCTGCCAT 93209 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||| || ||||| ||||| ||||| | ||||| | |||| || |||| Sbjct 93210 CCGTCGTCTGGCCCGGCGTGGAGGAGTTAAGCGCATTTCTGGCCTCATCTACGAGGAGAC 93269 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||||| | ||||| | | ||| |||| ||||| || || ||||| Sbjct 93270 CCGCGGGGTGTTGAAGGTGTTCCTGGAAAACGTGATCCGCGATGCGGTCACTTACACCGA 93329 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || || ||||||||| | |||||| | ||||| || ||||||| || || Sbjct 93330 ACATGCCAAGCGCAAAACTGTCACCGCTATGGATGTGGTCTACGCGCTGAAACGCCAGGG 93389 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || ||||| ||||| Sbjct 93390 CCGCACCCTCTACGGCTTTGGCGGTTAA 93417 >seq8532 Length=276393 Score = 159 bits (176), Expect = 5e-35 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 251544 CGCCAAGCGCCACCGCAAAGTCCTTCGTGATAACATCCAGGGCATCACTAAGCCTGCCAT 251485 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||||||||| ||||| || ||||| ||||||| | |||| || |||| Sbjct 251484 TCGGCGCCTGGCTCGTCGCGGTGGTGTGAAGCGCATCTCTGGTCTCATCTACGAGGAGAC 251425 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| ||||| | || || ||| ||| |||| || || || ||| ||||| Sbjct 251424 CCGCGGTGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGCGACGCGGTCACCTACACCGA 251365 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || |||||||||||| ||||||| | ||||| || | || || || || Sbjct 251364 ACACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 251305 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||||| | ||||| || || Sbjct 251304 CCGTACCCTCTATGGCTTCGG 251284 Score = 150 bits (166), Expect = 3e-32 Identities = 179/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | ||||| ||||||||||| || || || ||||| || || Sbjct 244149 CGCCAAGCGCCACCGCAAAGTCCTTCGTGATAACATCCAGGGCATTACTAAGCCTGCCAT 244208 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||||||||| ||||| || ||||| ||||||| | |||| || |||| Sbjct 244209 TCGGCGCCTGGCTCGTCGCGGTGGTGTGAAGCGAATCTCTGGGCTCATCTACGAGGAGAC 244268 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||| | ||||| ||| ||| |||| || || || ||| ||||| Sbjct 244269 CCGCGGGGTGCTGAAAGTGTTCCTGGAGAACGTGATCCGCGACGCGGTCACCTACACCGA 244328 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || || || || Sbjct 244329 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 244388 Query 16672 CCG 16674 ||| Sbjct 244389 CCG 244391 Score = 93.3 bits (102), Expect = 7e-15 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 253246 CGCCAAGCGCCACCGCAAAGTCCTTCGTGATAACATCCAGGGCATCACTAAGCCTGCCAT 253187 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || || ||||||||||| ||||| || ||||| ||||||| | |||| || |||| Sbjct 253186 TCGGCGCCTGGCTCGTCGCGGTGGTGTGAAGCGCATCTCTGGTCTCATCTACGAGGAGA 253128 >seq1836 Length=576598 Score = 152 bits (168), Expect = 8e-33 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || |||| ||| || || ||||| || || || ||||| || ||||| Sbjct 565748 GCTAAGCGCCACCGCAAGGTTCTGCGCGACAACATTCAGGGTATTACCAAACCCGCTATT 565807 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||||||||||||||| || |||||| | || || | |||||||||||| Sbjct 565808 CGTCGTCTGGCTCGTCGTGGTGGCGTAAAGCGTATTTCCGGTCTCATCTATGAAGAGACC 565867 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | || || | | || |||| || ||| || ||| || ||| Sbjct 565868 CGCGGGGTGCTGAAGGTGTTTCTGGAAAATGTGATCCGGGACGCTGTCACCTACACGGAG 565927 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || || ||||||||| |||||||| | || || || | || || || || Sbjct 565928 CACGCCAAGCGCAAAACTGTCACCGCCATGGATGTGGTTTACGCGCTTAAGCGCCAGGGA 565987 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| |||| || || || ||||| Sbjct 565988 CGTACCCTTTACGGCTTCGGCGGTTAA 566014 >seq8205 Length=379564 Score = 143 bits (158), Expect = 4e-30 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | || |||||||||||||||| ||||||||||| || || Sbjct 200642 CGCCAAGCGTCATCGCAAAGTCCTGAGAGATAACATCCAAGGCATCACCAAGCCCGCCAT 200583 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || || ||||| ||||| ||||| || || | || || | | || || |||| Sbjct 200582 TCGGCGCCTTGCTCGGCGTGGGGGAGTGAAACGCATTTCCGGCCTCATTTACGAGGAGAC 200523 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||||| | || || ||| |||||| | || ||| || ||| || || Sbjct 200522 CCGAGGCGTGTTGAAGGTGTTTCTGGAGAACGTTATTCGGGACGCTGTCACCTACACGGA 200463 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 200462 GCACGCCAAGCGCAAGACGGTCACTGCCATGGACGTGGTCTACGCGCTAAAGCGGCAGGG 200403 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || | | | || || || ||| ||| | || || Sbjct 200402 ACGCACGCTCTACGGCTTCGGAGGTTGAGCTGCT 200369 >seq8713 Length=250450 Score = 109 bits (120), Expect = 9e-20 Identities = 183/262 (70%), Gaps = 6/262 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| |||| | | | ||||| |||||| || ||||| ||||| |||| Sbjct 40053 CGCCAAGCGTCACCGCAAAGTTTTGCGAGA---CATCCAGGGCATCACTAAGCCCGCTAC 39997 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||| || | ||| | ||||||||||| |||| || |||| || |||| Sbjct 39996 TCGCCGCCTGACTAGGCGTAGAGGAGTCAAGCGCATCTCCGG--GCATCTACGAGGAGAC 39939 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| ||||| ||| || | || ||||| || ||| ||||| Sbjct 39938 CCCCGGGGTGCTGAAGGGGTTCCTGGAGAATGTGACCCGGGATGCAGTCACCTACACCGA 39879 Query 16612 GCACGCTAAACGTAAGACTGTCA-CCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||| || || || ||||||| || |||||||| | ||||| || | || || |||| Sbjct 39878 GCACGCCAAGCGCAAAACTGTCACCCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAAG 39819 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 | || | | ||||| || || Sbjct 39818 GACGCACCCTCTATGGCTTCGG 39797 >seq16205 Length=694624 Score = 107 bits (118), Expect = 3e-19 Identities = 169/241 (70%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| || |||| ||||| ||| | || || |||| |||||||||||| || ||| Sbjct 629680 AACATCCAGGGCATCAT-AAGCCTGCTCTTCGCCGCCTGGATCGTCGTGGTGGGGTGAAG 629622 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 || ||||||| | | ||||| |||| || | || |||| | || || ||| | Sbjct 629621 CGCATCTCTGGGCTCATGTATGAGGAGACCCGCGGGGTCCTGAAAGTGTTTCTGGAGAAC 629562 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 || ||| || || || ||| ||||||||||| || | ||| |||||||| ||||| Sbjct 629561 GTGGTCCGGGACGCGGTCACCTACACCGAGCACGCCAAGCAGAAGGCTGTCACCGCCATG 629502 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | ||||| || || | || ||||||| | || |||| || ||||| || Sbjct 629501 GACGTGGTCTACGCTCACAAGCACCACGGCCGTACCCTCTACAGTTTCGGTGGTTAAGCT 629442 Query 16703 T 16703 | Sbjct 629441 T 629441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79059633009018