Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq15871 84.2 2e-11 >seq15871 Length=707613 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/245 (68%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 26753 TTTTTAGTCAAACAAA--ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACC 26810 ||||| || |||| | ||||| | |||||||| || | ||||| ||| | ||||| Sbjct 27390 TTTTTGTTCCAACAGACAATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACCATCACT 27331 Query 26811 ATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAA 26870 | || | || | | |||||||||||| | ||||| ||||| || |||||| Sbjct 27330 CTGGAGGTGGAGCCCAGTGACACCATCGAGAATGTCAAGGGGAAGATACAAGAAAAAGAA 27271 Query 26871 GGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA 26930 || || || || || || || || | || | | || ||||| || ||||||| | Sbjct 27270 GGCATCCCCCCAGACCAGCAGAGGTTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGC 27211 Query 26931 AACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990 | | | ||||| ||||| || ||||| || ||| | || |||||||| | || ||| Sbjct 27210 ACCCTGTCTGACTACAACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGA 27151 Query 26991 GGAGG 26995 || || Sbjct 27150 GGTGG 27146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478560528674720