Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq7844 152 1e-31
seq8498 150 4e-31
seq6202 147 5e-30
seq11172 140 8e-28
seq13361 127 5e-24
seq10972 122 2e-22
seq1447 122 2e-22
seq15871 120 7e-22
seq16361 96.9 8e-15
seq10398 95.1 3e-14
seq10227 84.2 5e-11
>seq7844
Length=401405
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 263349 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 263290
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 263289 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 263230
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || ||||| ||||| |||
Sbjct 263229 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 263170
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 263169 TTGCCGGTCAGGGTCTTCACGAAGATCTG 263141
Score = 149 bits (164), Expect = 1e-30
Identities = 164/218 (75%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 263121 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 263062
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| |||
Sbjct 263061 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 263002
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 263001 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 262942
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || || || ||||| || ||||| ||||||
Sbjct 262941 TTGCCGGTCAGGGTCTTCACGAAGATTTG---CATTTT 262907
>seq8498
Length=279317
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| || || || ||||| ||||||||||| | ||||||||||| ||| ||
Sbjct 98932 CGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTA 98873
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| ||||| || || ||||| || | |||||||| ||| |||||||
Sbjct 98872 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCT 98813
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || ||| | || || | | ||| || || |
Sbjct 98812 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGA 98753
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||| || || ||||||||||| ||
Sbjct 98752 GTGATGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTG 98715
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | || ||| | || ||||||
Sbjct 98833 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACCTTGTCTGACTACAACA 98892
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
| || || ||||| |||||||| || || |||||||||||
Sbjct 98893 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCG 98932
>seq6202
Length=441370
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 3272 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3213
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 3212 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 3153
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 3152 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3093
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 3092 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3064
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 3500 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3441
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 3440 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 3381
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 3380 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3321
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 3320 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3292
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 3728 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3669
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 3668 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 3609
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 3608 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3549
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 3548 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3520
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 3956 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3897
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 3896 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 3837
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 3836 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3777
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 3776 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3748
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 4184 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 4125
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 4124 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 4065
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 4064 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4005
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 4004 TTGCCGGTCAGGGTCTTCACGAAGATCTG 3976
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 4412 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 4353
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 4352 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 4293
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 4292 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4233
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 4232 TTGCCGGTCAGGGTCTTCACGAAGATCTG 4204
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 4640 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 4581
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| || ||| ||||| |||
Sbjct 4580 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 4521
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 4520 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4461
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 4460 TTGCCGGTCAGGGTCTTCACGAAGATCTG 4432
Score = 114 bits (126), Expect = 3e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || |||||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 3044 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 2985
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||| | ||||||||| ||| ||| ||||| |||
Sbjct 2984 TCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2925
Query 199538 TGAATCTTTTGCTTCA 199553
|| ||||| |||||
Sbjct 2924 TGGATCTTGGCCTTCA 2909
>seq11172
Length=1040880
Score = 140 bits (154), Expect = 8e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| || || || ||||| ||||||||||| | ||||||||||| |||||| |
Sbjct 4330 GAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 4389
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || | ||||| || | |||||||| ||| ||||||||
Sbjct 4390 ATCCATCTTCCAGTTGCTTGCCAGAAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 4449
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | || |||| | || || || | |
Sbjct 4450 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTTTCTGAGGGCTCGACCTCGAGAG 4509
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| || || || || ||||| ||||| ||
Sbjct 4510 TGATGGTCTTCCCAGTCAGGGTCTTCACGAAAATCTG 4546
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| | || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 4428 AAAGACTGATCTTTTCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACA 4369
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 201028
| || || ||||| |||||||| || || ||||||||||
Sbjct 4368 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTC 4330
>seq13361
Length=1652743
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| ||||| | ||||| ||||||||||| | | ||||||||| ||||||
Sbjct 1224003 CGAAGTCTCAACACAAGATCAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTA 1224062
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||| ||||| || || ||||| || | |||| ||| ||| |||||||
Sbjct 1224063 CATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTAGTCAGGAGGAATTCCT 1224122
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || ||| | | | || | | | || || |
Sbjct 1224123 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATGCTATCCGGGGGCTTGACCTCAAGA 1224182
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||| | || || ||||| ||||| ||
Sbjct 1224183 GTGATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTG 1224220
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||| ||||| || || ||||| ||||||||||| | |||||| | || |||| |
Sbjct 1224102 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAGCA 1224043
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
| || || ||||| |||||| | ||||| |||||||||||
Sbjct 1224042 TTCAAAAGGAGTCCACTCTTGATCTTGTGTTGAGACTTCG 1224003
>seq10972
Length=1569106
Score = 122 bits (134), Expect = 2e-22
Identities = 162/226 (72%), Gaps = 8/226 (4%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||| ||||| || || || ||||| ||||||||||| | ||||||||||| ||||||
Sbjct 1317887 CGAATTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 1317828
Query 199469 CTTCCAT--------CTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAA 199520
| ||||| ||||||| ||||| || || ||||| || | |||||||| |||
Sbjct 1317827 CGTCCATACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAG 1317768
Query 199521 AAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTA 199580
||||||||| ||||| ||||| ||| || ||| | || || | | ||| |
Sbjct 1317767 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGA 1317708
Query 199581 CATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| || | || || ||||| ||||| || || ||||| ||||| ||
Sbjct 1317707 CCTCGAGAGTAATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTG 1317662
>seq1447
Length=2301054
Score = 122 bits (134), Expect = 2e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| || || || ||||| |||||||||| | ||||||||||| ||||||
Sbjct 2079814 GAAGTCTCAACACTAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 2079873
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| | | ||||| || ||| ||||||||
Sbjct 2079874 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGCTCAGGAGGAATTCCTT 2079933
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | || || | | ||| || | | |
Sbjct 2079934 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAG 2079993
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| ||| | || || ||||| ||||| ||
Sbjct 2079994 TGATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTG 2080030
>seq15871
Length=707613
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| ||||| || |||| ||||||||||| || || | ||||||
Sbjct 27161 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 27220
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| | | ||||||||| || || |||||| ||
Sbjct 27221 TCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCTTCTTTTTCT 27280
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 27281 TGTATCTTCCCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTT 27340
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || ||
Sbjct 27341 TTACCAGTGAGGGTCTTTACAAAGATCTG 27369
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| ||||| || |||| ||||||||||| || || | ||||||
Sbjct 26933 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 26992
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| | | ||||||||| || || || ||| ||
Sbjct 26993 TCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCT 27052
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || |||| ||||| |||
Sbjct 27053 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 27112
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || ||||| || || ||
Sbjct 27113 TTACCGGTCAGGGTCTTCACGAAGATCTG 27141
Score = 113 bits (124), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| | ||| ||||| ||||| || |||| ||||||||||| || || | |||||
Sbjct 26704 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATC 26763
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || || || ||||| | | ||||||||| || || || ||| ||
Sbjct 26764 TTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTC 26823
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 26824 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 26883
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || || || ||||| || || ||
Sbjct 26884 CTTACCAGTCAGGGTCTTCACGAAGATCTG 26913
>seq16361
Length=1029486
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| || || || ||| | |||||||| || | |||||| |||| ||||||
Sbjct 460834 CGAAGTCTCAACACTAGATGAAGAATGGACTCCTTCTGAATGTTGTACTCAGACAAAGTA 460893
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||||||| ||| | || || ||||| || | || ||| | ||| |||||
Sbjct 460894 TGTCCATCTTCCAGTTGCCTGCCAGCAAAGATCAGTCTTTGTTGGCCAGGAGGAATTCTC 460953
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || ||| | || || | | || || || |
Sbjct 460954 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGAGA 461013
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| | ||| || | || || ||||||||||| ||
Sbjct 461014 GTGATGGCCTTCTCCATCAGGGTCTTCACAAAAATCTG 461051
>seq10398
Length=86818
Score = 95.1 bits (104), Expect = 3e-14
Identities = 151/216 (70%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
|||| ||| |||| || || || | ||||||||| | |||||| | |||||| |
Sbjct 65840 AAGTTTCAATGCAAGATGCAGGGTGGGCTCCTTTTGAATATTGTAG---GTCAAAGTACA 65896
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
|||||||||||| ||||| || || ||||| || | |||||||| ||| || ||||||
Sbjct 65897 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAACTCCTTC 65956
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
||||| ||||| ||| | ||| || |||| || ||||| || | ||
Sbjct 65957 CTTATCCTGGATCTTGGCCTTTGCATTTTCTGTTGTATCTGAGGTCTCTACCTCAAGAGT 66016
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| | || || || |||| ||||| ||
Sbjct 66017 GATGGTCTTCACTGTCAGGGTCTTCATGAAAATCTG 66052
>seq10227
Length=1163854
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | ||||||||||| ||| || | |||||||||||| ||||| || || ||||
Sbjct 1068462 CCTTTTGAATGTTGTAGTCAGACAAGGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 1068403
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || | |||||||| ||| |||||||
Sbjct 1068402 TCAGTCTTTGCTGGTCAGGAGGAATTCCT 1068374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178664423410742
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