Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8872 176 4e-38 seq8009 136 3e-26 seq115 122 7e-22 seq11172 105 5e-17 seq10972 104 2e-16 seq8498 104 2e-16 seq6202 98.7 8e-15 seq2002 96.9 3e-14 seq1447 96.9 3e-14 seq7844 95.1 1e-13 seq13361 86.0 5e-11 >seq8872 Length=1380361 Score = 176 bits (194), Expect = 4e-38 Identities = 368/538 (68%), Gaps = 9/538 (2%) Strand=Plus/Plus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 || || ||||| |||||||||||||| || ||| |||| || ||| ||||| | || Sbjct 972118 AAGGTGGAAATAATTGCCAATGATCAGGGGAACTGAACCACCCCAAGCTATGTCACCTTT 972177 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || | || ||| || | ||||||| ||||| | |||| ||| ||||| ||| Sbjct 972178 ACTAATACCAAACGATTGATCAGTGATGCTGCAAAGAACCAAGTCACAATGAATCCCACC 972237 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || |||||||||| |||| | | |||| |||| ||||||||| | ||| ||| Sbjct 972238 AACACAGTTTTTGATGCCAAACAACTTAGTGGATGAAGATTTAATGATGCTGTTGTCCAG 972297 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | |||||||| |||||||| ||| | | |||| | |||| | |||| | || || Sbjct 972298 TCTGATATGAAACATTGGCCCTTCATGGTGGCAAATGATGCTGGCAGACCTAAGGTTTAA 972357 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTT 550347 | || |||| | ||| | |||| | | ||| | | ||||| ||||| | Sbjct 972358 G-TAGAATACAAGGGGGAGACAAAGAGTTTTGATCAAGAGGAGGTGTCATCCATGGTCCT 972416 Query 550348 AATGAAAATGAAACAAA-CAGCCAG-TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGT 550404 | || | ||| ||| || ||| || | |||| |||| ||||| | || || Sbjct 972417 GACAAAGAGGAAGGAAATCA--CAGAAGCCTGCCTTGG-GAAGACTGTTACCAACGCTGT 972473 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || ||||| || || ||||||||||| || ||||| || || |||||||||||| Sbjct 972474 TGTCACAGTACCTGCCTACTTTAATGACTCTCAGCGTCAGGCCACCAAAGATGCTGGAAC 972533 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||||| | || | ||| ||| | || |||| |||| | ||||||||||| | ||| || Sbjct 972534 TATTGCT-GTCTCAGTGTACTTAGAATCATCAGTGAAACAACTGCTGCTGCTCCTGCCTA 972592 Query 550525 TGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||| | || ||| | || ||| ||||| || |||||||||| || ||| Sbjct 972593 TGGCTTAGACAAAAAGGTTGGAGCAGAGAGAAATGTGCTGATCTTTGATTTGGGTGGT 972650 >seq8009 Length=358766 Score = 136 bits (150), Expect = 3e-26 Identities = 336/500 (67%), Gaps = 16/500 (3%) Strand=Plus/Minus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 || || || || || || ||||| || || || ||| | || || || || || | Sbjct 179172 GGCAAGGTAGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTACGTGGCC 179113 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAAT 550162 ||||| || || || | | | || ||||| || || | || ||||| || ||| Sbjct 179112 TTCACAGACACCGAGCGGCTCATCGGCGATGCGGCCAAGAACCAGGTAGCCA-TG--AAT 179056 Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT 550222 || || ||| | |||||||| |||||| | || || |||| ||||||||| | Sbjct 179055 CCCCAGAACACTGTCTTTGATGCCAAACGTCTGATCGGCAGAAAATTTAATGATCCTGTC 178996 Query 550223 GTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA- 550281 || || |||||||||| | ||||||||||||| | | || | || || || | Sbjct 178995 GTGCAATCAGATATGAAACTTTGGCCTTTCCAAGTAATCAACGAAGGAGGCAAGCCCAAG 178936 Query 550282 -TATTGAAG--CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC 550338 || || | |||| | | ||| | ||| |||| || || |||| || || Sbjct 178935 GTAATGGTGTCCTACAAAGG--GGAAAAG--AAAGCTTTTTATCCTGAGGAAATCTCTTC 178880 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGG 550397 |||||| | | || ||||| | || || |||||| |||| | | | || || Sbjct 178879 TATGGTACTGACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACTA 178821 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| ||||| || || |||||||| || ||||| || || || |||| Sbjct 178820 ATGCTGTGATCACTGTGCCAGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATG 178761 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| || || || ||||| || | |||||||||||||| ||||||||||| Sbjct 178760 CAGGTGTTATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCA 178701 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| | |||||| Sbjct 178700 TTGCCTATGGCTTAGATAAA 178681 >seq115 Length=644410 Score = 122 bits (134), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || || | || ||||| || || ||||||||||| || ||||| ||||| Sbjct 185397 GTTACCAACGCTGTTGTCACAGTACCTGCCTACTTTAATGACTCTCAGCGTCAGGCTACC 185456 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| |||||||||||| || || || || || |||||||| || |||||| Sbjct 185457 AAAGATGCTGGAACTATTGCTGGACTCAACGTACTGCGAATCATCAATGAGCCAACTGCT 185516 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 185517 GCTGCTATTGCCTATGG 185533 Score = 95.1 bits (104), Expect = 1e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||||| || | || || || ||| Sbjct 184582 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTTTTCCAGCACGGAAAGGTGGAA 184641 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| | || || || || Sbjct 184642 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACC 184701 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 |||| || | |||||||| ||||| | || | | | ||||| ||||| || || Sbjct 184702 GAACGATTGATCGGTGATGCTGCAAAGAACCAGGTCGCAATGAATCCCACCAACACGGTT 184761 Query 550178 TTTGATGCTAAACGTTTAATTGGAA 550202 |||| | || |||||||| || Sbjct 184762 TTTGGT----AAGCTTTAATTGTAA 184782 >seq11172 Length=1040880 Score = 105 bits (116), Expect = 5e-17 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 4341 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACATCCATCTT 4398 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || | ||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 4399 CCAGTTGCTTGCCAGAAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 4458 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || ||||| || | | | |||||||| | || | Sbjct 4459 GGATCTTGGCCTTTACATTTTCTATTGTTTCTGAGGGCTCGACCTCGAGAGTGATGGTCT 4518 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || || || |||||||| ||||| Sbjct 4519 TCCCAGTCAGGGTCTTCACGAAAATCTGCAT 4549 >seq10972 Length=1569106 Score = 104 bits (114), Expect = 2e-16 Identities = 120/158 (76%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| ||||| || || ||||| || ||||||||||| ||||||||||||||||| || Sbjct 1317814 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 1317755 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTA 563436 ||| || || || ||||| || |||||||| || || | || ||||||||| Sbjct 1317754 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCGAGAGTA 1317697 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || || || |||||||| ||||| Sbjct 1317696 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 1317659 >seq8498 Length=279317 Score = 104 bits (114), Expect = 2e-16 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | || | | ||||| Sbjct 98920 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAGGTACGTCCATCTT 98863 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 98862 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 98803 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACAGT 563441 | || || ||||| || |||||||| || || | || |||||||| | || Sbjct 98802 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCGAGAGTGATGGT 98745 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || || ||||| ||||| Sbjct 98744 CTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 98712 >seq6202 Length=441370 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 3282 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3225 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 3224 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3165 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 3164 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3106 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 3105 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3060 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 3510 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3453 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 3452 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3393 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 3392 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3334 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 3333 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3288 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 3738 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3681 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 3680 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3621 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 3620 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3562 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 3561 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3516 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 3966 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3909 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 3908 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3849 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 3848 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3790 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 3789 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3744 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 4194 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 4137 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 4136 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 4077 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 4076 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 4018 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 4017 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3972 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 4422 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 4365 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 4364 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 4305 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| ||||| || || || || || ||| || || ||| || | | || || Sbjct 4304 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 4246 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || || || || || ||||| || |||||| Sbjct 4245 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 4200 Score = 95.1 bits (104), Expect = 1e-13 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 3054 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 2997 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 2996 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 2937 Query 563371 CCTTCTTTATCTTGAATTTT 563390 ||||| ||||| || || || Sbjct 2936 CCTTCCTTATCCTGGATCTT 2917 >seq2002 Length=2058770 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || || Sbjct 405582 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 405523 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | ||||| | | || |||||||| || Sbjct 405522 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 405470 >seq1447 Length=2301054 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT-ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 || |||||||| || | | |||| | ||| ||||| |||| | ||| | |||||| Sbjct 2079825 ACTAGATGAAGAGTGAACTCCTTTTG-AATGTTGTAGTCAGACAAAGTATGTCCATCTTC 2079883 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || || ||||| || |||||||||| ||||||||||||||||| ||||| || Sbjct 2079884 CAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGCTCAGGAGGAATTCCTTCCTTATCCTG 2079943 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTT 563444 || || ||||| || |||||||| | | | | | |||||| | || || Sbjct 2079944 GATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTT 2080003 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || |||||||| ||||| Sbjct 2080004 CCCCATCAGGGTCTTCACGAAAATCTGCAT 2080033 >seq7844 Length=401405 Score = 95.1 bits (104), Expect = 1e-13 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| |||||||| || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 263359 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 263302 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||| || || || ||||| ||||||||||| Sbjct 263301 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 263242 Query 563371 CCTTCTTTATCTTGAATTTT 563390 ||||| ||||| || || || Sbjct 263241 CCTTCCTTATCCTGGATCTT 263222 >seq13361 Length=1652743 Score = 86.0 bits (94), Expect = 5e-11 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||| ||| || ||| |||| ||| |||| |||| | ||| | | ||||| Sbjct 1224015 ACAAGATCAAGAGTGGACTCCTTTTG--AATGCTGTAGTCAGACAAAGTACATCCATCTT 1224072 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || |||||||||| ||||||||||||||||| ||||| | Sbjct 1224073 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTAGTCAGGAGGAATTCCTTCCTTATCCT 1224132 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || || |||| | | | | || ||||| | || | Sbjct 1224133 GGATCTTGGCCTTTACATTTTCTATGCTATCCGGGGGCTTGACCTCAAGAGTGATGGTCT 1224192 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCA 563473 | || | || || || |||||||| |||| Sbjct 1224193 TCCCCATCAGGGTCTTCACGAAAATCTGCA 1224222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028395588332740