Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq8872 176 4e-38
seq8009 136 3e-26
seq115 122 7e-22
seq11172 105 5e-17
seq10972 104 2e-16
seq8498 104 2e-16
seq6202 98.7 8e-15
seq2002 96.9 3e-14
seq1447 96.9 3e-14
seq7844 95.1 1e-13
seq13361 86.0 5e-11
>seq8872
Length=1380361
Score = 176 bits (194), Expect = 4e-38
Identities = 368/538 (68%), Gaps = 9/538 (2%)
Strand=Plus/Plus
Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108
|| || ||||| |||||||||||||| || ||| |||| || ||| ||||| | ||
Sbjct 972118 AAGGTGGAAATAATTGCCAATGATCAGGGGAACTGAACCACCCCAAGCTATGTCACCTTT 972177
Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168
|| | || ||| || | ||||||| ||||| | |||| ||| ||||| |||
Sbjct 972178 ACTAATACCAAACGATTGATCAGTGATGCTGCAAAGAACCAAGTCACAATGAATCCCACC 972237
Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228
|| || |||||||||| |||| | | |||| |||| ||||||||| | ||| |||
Sbjct 972238 AACACAGTTTTTGATGCCAAACAACTTAGTGGATGAAGATTTAATGATGCTGTTGTCCAG 972297
Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288
| |||||||| |||||||| ||| | | |||| | |||| | |||| | || ||
Sbjct 972298 TCTGATATGAAACATTGGCCCTTCATGGTGGCAAATGATGCTGGCAGACCTAAGGTTTAA 972357
Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTT 550347
| || |||| | ||| | |||| | | ||| | | ||||| ||||| |
Sbjct 972358 G-TAGAATACAAGGGGGAGACAAAGAGTTTTGATCAAGAGGAGGTGTCATCCATGGTCCT 972416
Query 550348 AATGAAAATGAAACAAA-CAGCCAG-TGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGT 550404
| || | ||| ||| || ||| || | |||| |||| ||||| | || ||
Sbjct 972417 GACAAAGAGGAAGGAAATCA--CAGAAGCCTGCCTTGG-GAAGACTGTTACCAACGCTGT 972473
Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464
| || ||||| || || ||||||||||| || ||||| || || ||||||||||||
Sbjct 972474 TGTCACAGTACCTGCCTACTTTAATGACTCTCAGCGTCAGGCCACCAAAGATGCTGGAAC 972533
Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524
||||||| | || | ||| ||| | || |||| |||| | ||||||||||| | ||| ||
Sbjct 972534 TATTGCT-GTCTCAGTGTACTTAGAATCATCAGTGAAACAACTGCTGCTGCTCCTGCCTA 972592
Query 550525 TGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582
||| | || ||| | || ||| ||||| || |||||||||| || |||
Sbjct 972593 TGGCTTAGACAAAAAGGTTGGAGCAGAGAGAAATGTGCTGATCTTTGATTTGGGTGGT 972650
>seq8009
Length=358766
Score = 136 bits (150), Expect = 3e-26
Identities = 336/500 (67%), Gaps = 16/500 (3%)
Strand=Plus/Minus
Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105
|| || || || || || ||||| || || || ||| | || || || || || |
Sbjct 179172 GGCAAGGTAGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTACGTGGCC 179113
Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAAT 550162
||||| || || || | | | || ||||| || || | || ||||| || |||
Sbjct 179112 TTCACAGACACCGAGCGGCTCATCGGCGATGCGGCCAAGAACCAGGTAGCCA-TG--AAT 179056
Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT 550222
|| || ||| | |||||||| |||||| | || || |||| ||||||||| |
Sbjct 179055 CCCCAGAACACTGTCTTTGATGCCAAACGTCTGATCGGCAGAAAATTTAATGATCCTGTC 178996
Query 550223 GTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA- 550281
|| || |||||||||| | ||||||||||||| | | || | || || || |
Sbjct 178995 GTGCAATCAGATATGAAACTTTGGCCTTTCCAAGTAATCAACGAAGGAGGCAAGCCCAAG 178936
Query 550282 -TATTGAAG--CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC 550338
|| || | |||| | | ||| | ||| |||| || || |||| || ||
Sbjct 178935 GTAATGGTGTCCTACAAAGG--GGAAAAG--AAAGCTTTTTATCCTGAGGAAATCTCTTC 178880
Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGG 550397
|||||| | | || ||||| | || || |||||| |||| | | | || ||
Sbjct 178879 TATGGTACTGACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACTA 178821
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || ||||| ||||| || || |||||||| || ||||| || || || ||||
Sbjct 178820 ATGCTGTGATCACTGTGCCAGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATG 178761
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || ||| || || || ||||| || | |||||||||||||| |||||||||||
Sbjct 178760 CAGGTGTTATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCA 178701
Query 550518 TTGCATATGGACTTGATAAA 550537
|||| ||||| | ||||||
Sbjct 178700 TTGCCTATGGCTTAGATAAA 178681
>seq115
Length=644410
Score = 122 bits (134), Expect = 7e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| | || || | || ||||| || || ||||||||||| || ||||| |||||
Sbjct 185397 GTTACCAACGCTGTTGTCACAGTACCTGCCTACTTTAATGACTCTCAGCGTCAGGCTACC 185456
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| |||||||||||| || || || || || |||||||| || ||||||
Sbjct 185457 AAAGATGCTGGAACTATTGCTGGACTCAACGTACTGCGAATCATCAATGAGCCAACTGCT 185516
Query 550511 GCTGCACTTGCATATGG 550527
||||| |||| |||||
Sbjct 185517 GCTGCTATTGCCTATGG 185533
Score = 95.1 bits (104), Expect = 1e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | || ||||| ||| |||||| ||||||| || | || || || |||
Sbjct 184582 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTTTTCCAGCACGGAAAGGTGGAA 184641
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||||||||| || ||| |||| || ||| ||||| | || || || ||
Sbjct 184642 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACC 184701
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
|||| || | |||||||| ||||| | || | | | ||||| ||||| || ||
Sbjct 184702 GAACGATTGATCGGTGATGCTGCAAAGAACCAGGTCGCAATGAATCCCACCAACACGGTT 184761
Query 550178 TTTGATGCTAAACGTTTAATTGGAA 550202
|||| | || |||||||| ||
Sbjct 184762 TTTGGT----AAGCTTTAATTGTAA 184782
>seq11172
Length=1040880
Score = 105 bits (116), Expect = 5e-17
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323
|| |||||||| || ||| |||| ||| ||||| |||| | ||| | | |||||
Sbjct 4341 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACATCCATCTT 4398
Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383
| ||||| || || | ||| || ||||||||||| ||||||||||||||||| ||||| |
Sbjct 4399 CCAGTTGCTTGCCAGAAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 4458
Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443
| || || ||||| || ||||| || | | | |||||||| | || |
Sbjct 4459 GGATCTTGGCCTTTACATTTTCTATTGTTTCTGAGGGCTCGACCTCGAGAGTGATGGTCT 4518
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| ||||| || || || |||||||| |||||
Sbjct 4519 TCCCAGTCAGGGTCTTCACGAAAATCTGCAT 4549
>seq10972
Length=1569106
Score = 104 bits (114), Expect = 2e-16
Identities = 120/158 (76%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378
|||||| ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||
Sbjct 1317814 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 1317755
Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTA 563436
||| || || || ||||| || |||||||| || || | || |||||||||
Sbjct 1317754 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCGAGAGTA 1317697
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || || || || || || || |||||||| |||||
Sbjct 1317696 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 1317659
>seq8498
Length=279317
Score = 104 bits (114), Expect = 2e-16
Identities = 154/213 (72%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323
|| |||||||| || ||| |||| ||| ||||| |||| | || | | |||||
Sbjct 98920 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAGGTACGTCCATCTT 98863
Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383
| ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| |
Sbjct 98862 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 98803
Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACAGT 563441
| || || ||||| || |||||||| || || | || |||||||| | ||
Sbjct 98802 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCGAGAGTGATGGT 98745
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || || || || || || ||||| |||||
Sbjct 98744 CTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 98712
>seq6202
Length=441370
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 3282 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3225
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 3224 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3165
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 3164 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3106
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 3105 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3060
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 3510 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3453
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 3452 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3393
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 3392 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3334
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 3333 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3288
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 3738 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3681
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 3680 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3621
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 3620 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3562
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 3561 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3516
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 3966 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 3909
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 3908 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 3849
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 3848 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 3790
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 3789 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3744
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 4194 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 4137
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 4136 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 4077
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 4076 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 4018
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 4017 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3972
Score = 98.7 bits (108), Expect = 8e-15
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 4422 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 4365
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 4364 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 4305
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||| ||||| || || || || || ||| || || ||| || | | || ||
Sbjct 4304 CCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTC 4246
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || | || || || || || || || ||||| || ||||||
Sbjct 4245 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 4200
Score = 95.1 bits (104), Expect = 1e-13
Identities = 106/140 (76%), Gaps = 4/140 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 3054 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 2997
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 2996 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 2937
Query 563371 CCTTCTTTATCTTGAATTTT 563390
||||| ||||| || || ||
Sbjct 2936 CCTTCCTTATCCTGGATCTT 2917
>seq2002
Length=2058770
Score = 96.9 bits (106), Expect = 3e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || ||
Sbjct 405582 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 405523
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503
|||||||||||| |||||||||| | ||||| | | || |||||||| ||
Sbjct 405522 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 405470
>seq1447
Length=2301054
Score = 96.9 bits (106), Expect = 3e-14
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 563266 ACAAGATGAAGGGT-ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324
|| |||||||| || | | |||| | ||| ||||| |||| | ||| | ||||||
Sbjct 2079825 ACTAGATGAAGAGTGAACTCCTTTTG-AATGTTGTAGTCAGACAAAGTATGTCCATCTTC 2079883
Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384
||||| || || ||||| || |||||||||| ||||||||||||||||| ||||| ||
Sbjct 2079884 CAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGCTCAGGAGGAATTCCTTCCTTATCCTG 2079943
Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTT 563444
|| || ||||| || |||||||| | | | | | |||||| | || ||
Sbjct 2079944 GATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTT 2080003
Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || || |||||||| |||||
Sbjct 2080004 CCCCATCAGGGTCTTCACGAAAATCTGCAT 2080033
>seq7844
Length=401405
Score = 95.1 bits (104), Expect = 1e-13
Identities = 106/140 (76%), Gaps = 4/140 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| |||||||| || || || ||||| ||| | | ||| || |||||||||| |||
Sbjct 263359 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 263302
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || || |||||||| || || || ||||| |||||||||||
Sbjct 263301 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATG 263242
Query 563371 CCTTCTTTATCTTGAATTTT 563390
||||| ||||| || || ||
Sbjct 263241 CCTTCCTTATCCTGGATCTT 263222
>seq13361
Length=1652743
Score = 86.0 bits (94), Expect = 5e-11
Identities = 146/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323
||||||| ||| || ||| |||| ||| |||| |||| | ||| | | |||||
Sbjct 1224015 ACAAGATCAAGAGTGGACTCCTTTTG--AATGCTGTAGTCAGACAAAGTACATCCATCTT 1224072
Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383
| ||||| || || ||||| || |||||||||| ||||||||||||||||| ||||| |
Sbjct 1224073 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTAGTCAGGAGGAATTCCTTCCTTATCCT 1224132
Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443
| || || ||||| || || |||| | | | | || ||||| | || |
Sbjct 1224133 GGATCTTGGCCTTTACATTTTCTATGCTATCCGGGGGCTTGACCTCAAGAGTGATGGTCT 1224192
Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCA 563473
| || | || || || |||||||| ||||
Sbjct 1224193 TCCCCATCAGGGTCTTCACGAAAATCTGCA 1224222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028395588332740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |