Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq11295 95.1 3e-15
>seq11295
Length=36635
Score = 95.1 bits (104), Expect = 3e-15
Identities = 191/276 (69%), Gaps = 17/276 (6%)
Strand=Plus/Minus
Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017
|||| | ||| || ||||| ||| | |||||| | || || || || || || | |
Sbjct 33791 TTCCTTCTGGGTGCTATGGAAGAGTGGCTCCTCGTTCTGGCTTGGCAGCAAAACACTTCA 33732
Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077
| ||||| || |||||||| | ||| ||| | ||| || || ||||||||||| | |
Sbjct 33731 TAGATGTAGGAGCTGGTGTCACAGATGAAGATTCTAGAGGAAATGTTGGTGTTGTCCTGT 33672
Query 1078 TTAATTTTAGCGATAAG-CGTTTTCATATTTCAAGA--GGTGATAGGATTGCTCAGTTAA 1134
|||||||| || | || ||||| | |||| | |||||| | ||||| ||| | |
Sbjct 33671 TTAATTTTGGCAAAGAGACGTTT---GAAGTCAAAAAGGGTGATCGAATTGCACAGCTCA 33615
Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC---CTTAGAGGATTC 1189
|||||| || || | |||| | ||| |||||| ||| ||| ||| | || |
Sbjct 33614 TTTGTG-AACGGATATTTT---ACCCA--GAAATAGAGGAAGTTCAAGTTTACATGACAC 33561
Query 1190 GGAAAGGGGTTCTGCAGGATTTGGGTCTACCGGAAG 1225
|||||| |||| | ||| ||||| || || |||||
Sbjct 33560 TGAAAGGCGTTCAGGAGGGTTTGGTTCCACTGGAAG 33525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138653560834056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |