Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2503 84.2 3e-11 >seq2503 Length=998701 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||||||||| || || |||||||| |||||||| |||| || |||| ||||||| Sbjct 733129 CACCATAAGGAGAGCGCGGGTAGAAAGGCGTGGTCTCCTTCTGAGGTATCTCCTGCACCT 733188 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174 | || || || || || || || ||||| |||| || ||| Sbjct 733189 TCCCGTAGAGCTCGCTCGTCGAGGCTTGGTAGAACCGCACC 733229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665352766154320