Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq8205 143 3e-28
seq16993 138 1e-26
seq8713 129 7e-24
seq1836 129 7e-24
seq12761 125 9e-23
seq8532 125 9e-23
seq7830 125 9e-23
seq9806 118 1e-20
seq10374 96.9 4e-14
seq1936 91.5 2e-12
seq15638 87.8 2e-11
seq9249 87.8 2e-11
seq4880 87.8 2e-11
>seq8205
Length=379564
Score = 143 bits (158), Expect = 3e-28
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| |||||| ||| | |||||||||||| ||||||||||| || | ||| ||
Sbjct 167423 GCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTC 167364
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| | ||||||| || || ||| ||||||| |||| ||||||
Sbjct 167363 GAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGATGTCG 167304
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
||||||||||||||||||| ||| | |||| |||||||| ||| |||||||||
Sbjct 167303 TTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACC 167244
Query 1254528 TGCTTGAGCACCTTGTA 1254544
||||| |||||||||||
Sbjct 167243 TGCTTCAGCACCTTGTA 167227
Score = 143 bits (158), Expect = 3e-28
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| |||||| ||| | |||||||||||| ||||||||||| || | ||| ||
Sbjct 187780 GCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTC 187721
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| | ||||||| || || ||| ||||||| |||| ||||||
Sbjct 187720 GAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGATGTCG 187661
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
||||||||||||||||||| ||| | |||| |||||||| ||| |||||||||
Sbjct 187660 TTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACC 187601
Query 1254528 TGCTTGAGCACCTTGTA 1254544
||||| |||||||||||
Sbjct 187600 TGCTTCAGCACCTTGTA 187584
Score = 98.7 bits (108), Expect = 1e-14
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| |||||| ||| | ||||||||| || ||||||||||| || | || |
Sbjct 211877 TGGCCAGCTCGCCGGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGAAGTAATGG 211818
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || || || | ||||| |||| || |
Sbjct 211817 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCTTCCCCAGCAATGCGCTCGAAAATAT 211758
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
| ||||| || |||||||||| ||| | ||| |||||||| ||| ||||| |
Sbjct 211757 CATTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCCGGGTGTA 211698
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
| || || |||||||||||
Sbjct 211697 CTTGTTTCAGCACCTTGTA 211679
>seq16993
Length=658208
Score = 138 bits (152), Expect = 1e-26
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 81155 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 81214
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 81215 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 81274
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||||||||| |
Sbjct 81275 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGTGGA 81334
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 81335 CCTGCTTCAGCACCTTGTA 81353
Score = 134 bits (148), Expect = 2e-25
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 7019 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 7078
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 7079 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 7138
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 7139 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 7198
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 7199 CCTGCTTCAGCACCTTGTA 7217
Score = 134 bits (148), Expect = 2e-25
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 54665 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 54724
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 54725 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 54784
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 54785 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 54844
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 54845 CCTGCTTCAGCACCTTGTA 54863
Score = 134 bits (148), Expect = 2e-25
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 66414 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 66473
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 66474 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 66533
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 66534 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 66593
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 66594 CCTGCTTCAGCACCTTGTA 66612
Score = 134 bits (148), Expect = 2e-25
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 113924 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 113865
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 113864 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCGAAGATGT 113805
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 113804 CGTTGACGAAGGAGTTCATGATTCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 113745
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 113744 CCTGCTTCAGCACCTTGTA 113726
Score = 125 bits (138), Expect = 9e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| | | | |||||||||||| ||||||||||| | | ||| |
Sbjct 46777 TGGCCAGCTCCCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 46718
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| ||||||| |||| ||||
Sbjct 46717 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAATGT 46658
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| || ||||| ||| ||||| |
Sbjct 46657 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCCGGGTGGA 46598
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 46597 CCTGCTTCAGCACCTTGTA 46579
Score = 95.1 bits (104), Expect = 1e-13
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| | | | |||||||||||| ||||||||||| | | ||
Sbjct 166054 GCTTGGCCAGCTCCCCGGGTAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 165995
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||| || | |||||||| || |||||| ||||||| || | |
Sbjct 165994 TAGTCGAGCGCTTATTGTAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCAAAAA 165935
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || || || ||||||| ||| | ||| |||||||| || || |
Sbjct 165934 TGTCGTTCACGAAGGAATTCATGATGCCCATGGCCTTAGATGAGATGCCAGTATCTGGAT 165875
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| || ||||||||
Sbjct 165874 GGACCTGCTTCAGAACCTTGTA 165853
>seq8713
Length=250450
Score = 129 bits (142), Expect = 7e-24
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 39377 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 39318
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | || |||||||| ||||| ||||||| |||| ||||
Sbjct 39317 TCGAGCGCTTGTTGTAATGAGCCAGACGCGACGCCTCACCCGCGATGCGCTCGAAGATGT 39258
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 39257 CGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGAA 39198
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 39197 CCTGCTTCAGCACCTTGTA 39179
Score = 129 bits (142), Expect = 7e-24
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 48102 TGGCCAGCTCCCCGGGCAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 48043
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||| ||||| | |||||||| || |||||| |||| || |||| ||||
Sbjct 48042 TCGAGCGTTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAAAATGT 47983
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||| |||||||||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 47982 CGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 47923
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 47922 CCTGCTTCAGCACCTTGTA 47904
>seq1836
Length=576598
Score = 129 bits (142), Expect = 7e-24
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 556380 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 556439
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| |||| || |||| ||||
Sbjct 556440 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAATATGT 556499
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 556500 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 556559
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 556560 CCTGCTTCAGCACCTTGTA 556578
>seq12761
Length=892269
Score = 125 bits (138), Expect = 9e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 425430 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 425489
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | || |||| || |||||| ||||||| |||| ||||
Sbjct 425490 TCGAGCGCTTGTTGTAATGAGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 425549
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 425550 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 425609
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 425610 CCTGCTTCAGCACCTTGTA 425628
>seq8532
Length=276393
Score = 125 bits (138), Expect = 9e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 273896 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 273837
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||| ||||| | || ||||| || |||||| ||||||| |||| ||||
Sbjct 273836 TCGAGCGTTTGTTATAATGGGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 273777
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 273776 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 273717
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 273716 CCTGCTTCAGCACCTTGTA 273698
Score = 120 bits (132), Expect = 4e-21
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 257348 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 257289
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| |||| || |||| ||||
Sbjct 257288 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAATATGT 257229
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||| || || || ||||||| ||| | |||| |||||||| ||| ||||| |
Sbjct 257228 CGTTCACGAATGAATTCATGATGCCCATAGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 257169
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
||||||| |||||||||||
Sbjct 257168 CCTGCTTCAGCACCTTGTA 257150
Score = 116 bits (128), Expect = 5e-20
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 236156 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 236215
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | || |||| || |||||| ||||||| |||| ||||
Sbjct 236216 TCGAGCGCTTGTTGTAATGAGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 236275
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
||||||| || |||||||||| ||| | ||| |||||||| ||| ||||| |
Sbjct 236276 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGA 236335
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
|||| || |||||||||||
Sbjct 236336 CCTGTTTCAGCACCTTGTA 236354
Score = 96.9 bits (106), Expect = 4e-14
Identities = 128/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |
Sbjct 266770 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 266829
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| ||||||||| | |||||||| || |||||| |||| || |||| ||||
Sbjct 266830 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAAGATGT 266889
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTG 1254523
||||||| || || ||||||| ||| | |||| |||||||| ||| |||||
Sbjct 266890 CGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGTG 266947
>seq7830
Length=512544
Score = 125 bits (138), Expect = 9e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||||| |||||| ||| | ||||||||| || ||||| | ||| || | ||| |
Sbjct 418183 TGGCCAACTCGCCGGGCAACAGCAGGCGCACCGCCGTCTGCACCTCTCGGGACGTGATGG 418124
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| |||||||| ||||||||| |||| ||||||| || ||||||| |||| ||||
Sbjct 418123 TAGAACGCTTGTTGTAGTGCGCCAAACGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGT 418064
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||| || ||||||||||||| ||| | ||| ||||| || ||| |||||||
Sbjct 418063 CGTTCACGAACGAGTTCATGATGCCCATAGCTTTGGAAGAGATACCGGTGTCCGGGTGCA 418004
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
| ||||| | |||||| ||
Sbjct 418003 CTTGCTTCAACACCTTATA 417985
>seq9806
Length=1249300
Score = 118 bits (130), Expect = 1e-20
Identities = 148/200 (74%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGC-GCGTGCCGATC 1254404
||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| |||
Sbjct 913386 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGGTGT-GATG 913444
Query 1254405 GTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATG 1254464
|| |||||||| | |||||||| || |||||| |||||| |||| |||
Sbjct 913445 GTCGAGCGCTTGT---AATGCGCCAGGCGCGACGCCTCGCCAGCGATGCACTCGAAGATG 913501
Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524
||||| || || || ||||||| ||| | |||| |||||||| ||| |||||
Sbjct 913502 TCGTTCACGAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGG 913561
Query 1254525 ACCTGCTTGAGCACCTTGTA 1254544
|||||||| |||||||||||
Sbjct 913562 ACCTGCTTCAGCACCTTGTA 913581
>seq10374
Length=112902
Score = 96.9 bits (106), Expect = 4e-14
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | |||||| || || ||||||||||| | | ||| |
Sbjct 10372 TGGCCAGCTCCCCGGGCAGCAGCAGGCGTACAGCCGTCTGGATCTCCCTGGACGTGATAG 10313
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | || ||||| || ||||| | ||||| || | ||||
Sbjct 10312 TGCAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCACCTGCAATGCGCTCAAAAATGT 10253
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
| ||||||| || ||||||| ||| | ||| ||||||||| || ||||| |
Sbjct 10252 CACTGACAAAGGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCCGTATCTGGGTGAA 10193
Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548
| ||||| | |||||||||||||
Sbjct 10192 CTTGCTTCAACACCTTGTAGATG 10170
>seq1936
Length=718054
Score = 91.5 bits (100), Expect = 2e-12
Identities = 137/191 (72%), Gaps = 8/191 (4%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG-TGCCG 1254401
|| ||||||| || || ||| | ||| |||||||| ||||||| ||| || | || |
Sbjct 494949 GCTTGGCCAGCTCTCCAGGCAGCAGCAGACGCACGGCCGTCTGGACCTCCCGGGATGTCA 494890
Query 1254402 ATCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCG 1254458
| ||| | || | ||||| | ||||| ||| |||||||| | | || ||
Sbjct 494889 GT-GTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCGGCCTCGCCAGCCAGCCGCTCA 494834
Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518
| || ||||| |||||||||||||||| ||| | |||| ||||||||| | ||||
Sbjct 494833 AACAGATCGTTCACAAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGATGTCG 494774
Query 1254519 GGGTGCACCTG 1254529
|||||||||||
Sbjct 494773 GGGTGCACCTG 494763
>seq15638
Length=717821
Score = 87.8 bits (96), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| ||||||||| | || | || || |||||| | |||||||| | |||| ||| ||
Sbjct 123732 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 123791
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| || || ||||||||||| || | || |||||||| || |||||
Sbjct 123792 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 123851
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 123852 TTCAATATCAA 123862
>seq9249
Length=5680458
Score = 87.8 bits (96), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| ||||||||| | || | || || |||||| | |||||||| | |||| ||| ||
Sbjct 403692 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 403633
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| || || ||||||||||| || | || |||||||| || |||||
Sbjct 403632 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 403573
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 403572 TTCAATATCAA 403562
>seq4880
Length=771866
Score = 87.8 bits (96), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| ||||||||| | || | || || |||||| | |||||||| | |||| ||| ||
Sbjct 369853 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 369912
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| || || ||||||||||| || | || |||||||| || |||||
Sbjct 369913 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 369972
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 369973 TTCAATATCAA 369983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105741966707242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |