Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8205 143 3e-28 seq16993 138 1e-26 seq8713 129 7e-24 seq1836 129 7e-24 seq12761 125 9e-23 seq8532 125 9e-23 seq7830 125 9e-23 seq9806 118 1e-20 seq10374 96.9 4e-14 seq1936 91.5 2e-12 seq15638 87.8 2e-11 seq9249 87.8 2e-11 seq4880 87.8 2e-11 >seq8205 Length=379564 Score = 143 bits (158), Expect = 3e-28 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| |||||| ||| | |||||||||||| ||||||||||| || | ||| || Sbjct 167423 GCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTC 167364 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | ||||||| || || ||| ||||||| |||| |||||| Sbjct 167363 GAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGATGTCG 167304 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||||||||||||||||| ||| | |||| |||||||| ||| ||||||||| Sbjct 167303 TTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACC 167244 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 167243 TGCTTCAGCACCTTGTA 167227 Score = 143 bits (158), Expect = 3e-28 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| |||||| ||| | |||||||||||| ||||||||||| || | ||| || Sbjct 187780 GCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGATGGTC 187721 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | ||||||| || || ||| ||||||| |||| |||||| Sbjct 187720 GAGCGCTTGTTGTAATGCGCCAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGATGTCG 187661 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||||||||||||||||| ||| | |||| |||||||| ||| ||||||||| Sbjct 187660 TTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGCACC 187601 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 187600 TGCTTCAGCACCTTGTA 187584 Score = 98.7 bits (108), Expect = 1e-14 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| |||||| ||| | ||||||||| || ||||||||||| || | || | Sbjct 211877 TGGCCAGCTCGCCGGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCGGGAAGTAATGG 211818 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || || || | ||||| |||| || | Sbjct 211817 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCTTCCCCAGCAATGCGCTCGAAAATAT 211758 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 | ||||| || |||||||||| ||| | ||| |||||||| ||| ||||| | Sbjct 211757 CATTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCCGGGTGTA 211698 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | || || ||||||||||| Sbjct 211697 CTTGTTTCAGCACCTTGTA 211679 >seq16993 Length=658208 Score = 138 bits (152), Expect = 1e-26 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 81155 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 81214 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 81215 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 81274 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||||||||| | Sbjct 81275 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGTGGA 81334 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 81335 CCTGCTTCAGCACCTTGTA 81353 Score = 134 bits (148), Expect = 2e-25 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 7019 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 7078 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 7079 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 7138 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 7139 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 7198 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 7199 CCTGCTTCAGCACCTTGTA 7217 Score = 134 bits (148), Expect = 2e-25 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 54665 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 54724 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 54725 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 54784 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 54785 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 54844 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 54845 CCTGCTTCAGCACCTTGTA 54863 Score = 134 bits (148), Expect = 2e-25 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 66414 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 66473 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 66474 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 66533 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 66534 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 66593 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 66594 CCTGCTTCAGCACCTTGTA 66612 Score = 134 bits (148), Expect = 2e-25 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 113924 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 113865 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 113864 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGATGCCTCGCCCGCGATGCGCTCGAAGATGT 113805 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 113804 CGTTGACGAAGGAGTTCATGATTCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 113745 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 113744 CCTGCTTCAGCACCTTGTA 113726 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| | | | |||||||||||| ||||||||||| | | ||| | Sbjct 46777 TGGCCAGCTCCCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 46718 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| |||| Sbjct 46717 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAATGT 46658 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| || ||||| ||| ||||| | Sbjct 46657 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCCGGGTGGA 46598 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 46597 CCTGCTTCAGCACCTTGTA 46579 Score = 95.1 bits (104), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||||||| ||||||||||| | | || Sbjct 166054 GCTTGGCCAGCTCCCCGGGTAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 165995 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | |||||||| || |||||| ||||||| || | | Sbjct 165994 TAGTCGAGCGCTTATTGTAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCAAAAA 165935 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || || ||||||| ||| | ||| |||||||| || || | Sbjct 165934 TGTCGTTCACGAAGGAATTCATGATGCCCATGGCCTTAGATGAGATGCCAGTATCTGGAT 165875 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 165874 GGACCTGCTTCAGAACCTTGTA 165853 >seq8713 Length=250450 Score = 129 bits (142), Expect = 7e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 39377 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 39318 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | || |||||||| ||||| ||||||| |||| |||| Sbjct 39317 TCGAGCGCTTGTTGTAATGAGCCAGACGCGACGCCTCACCCGCGATGCGCTCGAAGATGT 39258 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 39257 CGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGAA 39198 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 39197 CCTGCTTCAGCACCTTGTA 39179 Score = 129 bits (142), Expect = 7e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 48102 TGGCCAGCTCCCCGGGCAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 48043 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||| ||||| | |||||||| || |||||| |||| || |||| |||| Sbjct 48042 TCGAGCGTTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAAAATGT 47983 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| |||||||||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 47982 CGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 47923 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 47922 CCTGCTTCAGCACCTTGTA 47904 >seq1836 Length=576598 Score = 129 bits (142), Expect = 7e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 556380 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 556439 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| |||| || |||| |||| Sbjct 556440 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAATATGT 556499 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 556500 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 556559 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 556560 CCTGCTTCAGCACCTTGTA 556578 >seq12761 Length=892269 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 425430 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 425489 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | || |||| || |||||| ||||||| |||| |||| Sbjct 425490 TCGAGCGCTTGTTGTAATGAGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 425549 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 425550 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 425609 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 425610 CCTGCTTCAGCACCTTGTA 425628 >seq8532 Length=276393 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 273896 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 273837 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||| ||||| | || ||||| || |||||| ||||||| |||| |||| Sbjct 273836 TCGAGCGTTTGTTATAATGGGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 273777 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 273776 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 273717 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 273716 CCTGCTTCAGCACCTTGTA 273698 Score = 120 bits (132), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 257348 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 257289 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| |||| || |||| |||| Sbjct 257288 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAATATGT 257229 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| || || || ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 257228 CGTTCACGAATGAATTCATGATGCCCATAGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 257169 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 257168 CCTGCTTCAGCACCTTGTA 257150 Score = 116 bits (128), Expect = 5e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 236156 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 236215 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | || |||| || |||||| ||||||| |||| |||| Sbjct 236216 TCGAGCGCTTGTTGTAATGAGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 236275 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | ||| |||||||| ||| ||||| | Sbjct 236276 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGTGGA 236335 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 |||| || ||||||||||| Sbjct 236336 CCTGTTTCAGCACCTTGTA 236354 Score = 96.9 bits (106), Expect = 4e-14 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 266770 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 266829 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| |||| || |||| |||| Sbjct 266830 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATACGCTCGAAGATGT 266889 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTG 1254523 ||||||| || || ||||||| ||| | |||| |||||||| ||| ||||| Sbjct 266890 CGTTGACGAAGGAATTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGTG 266947 >seq7830 Length=512544 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| |||||| ||| | ||||||||| || ||||| | ||| || | ||| | Sbjct 418183 TGGCCAACTCGCCGGGCAACAGCAGGCGCACCGCCGTCTGCACCTCTCGGGACGTGATGG 418124 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| ||||||||| |||| ||||||| || ||||||| |||| |||| Sbjct 418123 TAGAACGCTTGTTGTAGTGCGCCAAACGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGT 418064 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| || ||||||||||||| ||| | ||| ||||| || ||| ||||||| Sbjct 418063 CGTTCACGAACGAGTTCATGATGCCCATAGCTTTGGAAGAGATACCGGTGTCCGGGTGCA 418004 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | ||||| | |||||| || Sbjct 418003 CTTGCTTCAACACCTTATA 417985 >seq9806 Length=1249300 Score = 118 bits (130), Expect = 1e-20 Identities = 148/200 (74%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGC-GCGTGCCGATC 1254404 ||||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| ||| Sbjct 913386 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGGTGT-GATG 913444 Query 1254405 GTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATG 1254464 || |||||||| | |||||||| || |||||| |||||| |||| ||| Sbjct 913445 GTCGAGCGCTTGT---AATGCGCCAGGCGCGACGCCTCGCCAGCGATGCACTCGAAGATG 913501 Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524 ||||| || || || ||||||| ||| | |||| |||||||| ||| ||||| Sbjct 913502 TCGTTCACGAATGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGG 913561 Query 1254525 ACCTGCTTGAGCACCTTGTA 1254544 |||||||| ||||||||||| Sbjct 913562 ACCTGCTTCAGCACCTTGTA 913581 >seq10374 Length=112902 Score = 96.9 bits (106), Expect = 4e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||| || || ||||||||||| | | ||| | Sbjct 10372 TGGCCAGCTCCCCGGGCAGCAGCAGGCGTACAGCCGTCTGGATCTCCCTGGACGTGATAG 10313 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| | || ||||| || ||||| | ||||| || | |||| Sbjct 10312 TGCAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCACCTGCAATGCGCTCAAAAATGT 10253 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 | ||||||| || ||||||| ||| | ||| ||||||||| || ||||| | Sbjct 10252 CACTGACAAAGGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCCGTATCTGGGTGAA 10193 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 | ||||| | ||||||||||||| Sbjct 10192 CTTGCTTCAACACCTTGTAGATG 10170 >seq1936 Length=718054 Score = 91.5 bits (100), Expect = 2e-12 Identities = 137/191 (72%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG-TGCCG 1254401 || ||||||| || || ||| | ||| |||||||| ||||||| ||| || | || | Sbjct 494949 GCTTGGCCAGCTCTCCAGGCAGCAGCAGACGCACGGCCGTCTGGACCTCCCGGGATGTCA 494890 Query 1254402 ATCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCG 1254458 | ||| | || | ||||| | ||||| ||| |||||||| | | || || Sbjct 494889 GT-GTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCGGCCTCGCCAGCCAGCCGCTCA 494834 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | || ||||| |||||||||||||||| ||| | |||| ||||||||| | |||| Sbjct 494833 AACAGATCGTTCACAAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGATGTCG 494774 Query 1254519 GGGTGCACCTG 1254529 ||||||||||| Sbjct 494773 GGGTGCACCTG 494763 >seq15638 Length=717821 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 123732 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 123791 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || ||||||||||| || | || |||||||| || ||||| Sbjct 123792 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 123851 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 123852 TTCAATATCAA 123862 >seq9249 Length=5680458 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 403692 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 403633 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || ||||||||||| || | || |||||||| || ||||| Sbjct 403632 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 403573 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 403572 TTCAATATCAA 403562 >seq4880 Length=771866 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| | || | || || |||||| | |||||||| | |||| ||| || Sbjct 369853 ACACTCTTTGAGCTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 369912 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || ||||||||||| || | || |||||||| || ||||| Sbjct 369913 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 369972 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 369973 TTCAATATCAA 369983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105741966707242