Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq3969 89.7 5e-13 >seq3969 Length=499942 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| || || || || |||||||||||| ||||||||| ||| ||||||| Sbjct 224596 TCCTCTGGAAGGTCCCATCCAGCGCAGCCACGATGACGGTCTTCCCCGAGTTGGCCATGT 224655 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 |||||||||||||| | ||| Sbjct 224656 TTTCGCAGAACTCCACGATGTC 224677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475940286446480