Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq6424 113 4e-20 >seq6424 Length=433988 Score = 113 bits (124), Expect = 4e-20 Identities = 216/316 (68%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| || || ||||| ||| || ||| |||| | |||||| | || | Sbjct 290371 ATGCCTTCTATGTTGCGGACCTGGGAGACATTCTGAAGAAACATCTGAGATGGTTGAAAG 290312 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323 || | ||| |||| || ||||| || || || | | || | || || | | Sbjct 290311 CTCTTCCTCGGGTCACCCCCTTTTATGCAGTCAAATGCAATGATAGCAGAACGA-TAGTG 290253 Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383 ||||| || |||||| || || || |||||||||||||| ||| || || || || Sbjct 290252 AAGACACTCGCTGCCATTGGGACAGGATTTGACTGTGCCAGCAAGACTGAAATACAATTG 290193 Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443 |||| | ||| || || | | |||| ||||| | | ||| ||||| ||||| || Sbjct 290192 GTGCAGAGTCTCGGGGTGCCCCCAGAGAGGATTATCTATGCAAATCCGTGTAAACAAGTG 290133 Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503 || || || | ||| || || | | ||||| | ||||||||||||||||||||| Sbjct 290132 TCTCAGATTAAGTACGCTGCCAATAACGGAGTCCAGATGATGACTTTTGATAGTGAAGTT 290073 Query 20504 GAGCTTACCAAAATTG 20519 ||||| | ||| ||| Sbjct 290072 GAGCTGATGAAAGTTG 290057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463446945907680