Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_027016.1
Length=226084
Score E
Sequences producing significant alignments: (Bits) Value
seq9234 118 2e-21
seq9072 86.0 9e-12
>seq9234
Length=186048
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055
|||| ||| | || || | || ||||| || ||||| || | | || | ||| | |
Sbjct 10126 AGATGATTAATGGAGAGATGTATCCTCCCACAGTCAAAGATACTCAGGTCGAAATGATCT 10067
Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115
|| ||| ||||| ||| | ||| || || |||| | ||| | ||||| || |
Sbjct 10066 ACCCACCTCATGTTCCTGAACACTTAAAGTTTGCTGTGGGCCAGGAGGTCTTTGGTCTGG 10007
Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175
|||| ||| | ||| |||| |||| || |||||| | || |||||||| || || || |
Sbjct 10006 TGCCTGGTCTGATGATGTATGCCACCATTTGGCTGCGGGAACACAACAGAGTGTGTGATG 9947
Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223
|||||||||||||||| || |||||| ||| || ||| |||||||||
Sbjct 9946 TGCTGAAACAAGAGCATCCAGAATGGGGCGATGAGCAGTTGTTCCAGA 9899
>seq9072
Length=1341007
Score = 86.0 bits (94), Expect = 9e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 214104 TGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACA 214163
||||||| || | || || ||||| | ||||||| ||||||||| | |||||||||
Sbjct 719243 TGTTTGGGCTGCTTCCTGGGCTCATGCTCTACGCCACGATCTGGCTGCGTGAGCACAACC 719302
Query 214164 GGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223
| || || ||| ||||||| |||||||| ||| |||||||||||| |||||||
Sbjct 719303 GTGTGTGTGACCTGCTGAAGGCTGAGCACCCCACCTGGGGCGACGAACAGCTCTTCCAGA 719362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723186854994240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |