Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5291 89.7 6e-13 >seq5291 Length=463539 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 ||||||| || ||||| ||||| ||||||||||| |||||||| ||||||| | |||| Sbjct 29822 AGTCTCAGACAGAGACAGGTACCCCATACATGCTGTACAAAGATTCCTGTAATCGGAAGA 29763 Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 | || || |||| ||||| ||||| | ||| | || |||||||| |||| | Sbjct 29762 GCAACCAGCAGAACTTGGGAACCATCAAATGCAGCAACTTGTGCACAGAAATAGTGGAGT 29703 Query 105024 TTACAGACAAAGATGAG 105040 ||| |||||||||| Sbjct 29702 ATACCAGCAAAGATGAG 29686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583136667520240