Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2560 86.0 5e-12 >seq2560 Length=892758 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| |||| | |||| || || ||||| || | | || ||||| ||||| | || Sbjct 722318 GATCTCCCTCTCATGGCCCTCCCCCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 722377 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||||| | |||||||| | ||||| | ||||| || |||||||| || || || ||| Sbjct 722378 GGTGAGCTGTCCTGCCAGTTGTACCAACGGTCGGGAGACATGGGCCTGGGTGTGCCCTTC 722437 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACAT 19111 |||||||| | || || || || |||||||| Sbjct 722438 AACATTGCCAGCTACGCCCTGCTCACCTACAT 722469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395427813122055