Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq61072 306 4e-78 seq43242 297 2e-75 seq2560 176 5e-39 seq28392 165 1e-35 seq605834 154 2e-32 seq12021 125 8e-24 seq2154 102 1e-16 >seq61072 Length=12731 Score = 306 bits (338), Expect = 4e-78 Identities = 610/897 (68%), Gaps = 14/897 (2%) Strand=Plus/Plus Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531 ||| | |||||| || ||||| |||| || |||||||| | | |||||| | Sbjct 1419 CCCCCACTGTATTCCCTGGTGTTCACGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 1478 Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591 || ||| || ||||| || | || | | | || ||||| | ||| | ||| |||| Sbjct 1479 ATCCTCACAAAATACAAGAGGCTCCATATTATGACCAACATCTACCTGCTCAACCTGGCC 1538 Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651 || ||||| |||| || || || || ||||||| ||||| |||||| || | || | Sbjct 1539 ATTTCTGATGTGCTCTTCCTGTTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGAA 1597 Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711 | || ||| |||||| | ||||||| | ||| || | | ||||||| Sbjct 1598 C--GAGTGGGTTTTTGGCCACCGCATGTGTAAGTTACTCTCCGGGCTCTATTACATGGGT 1655 Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771 ||||||| || |||| | ||||||||| | || ||||| |||| || || | ||| Sbjct 1656 TTGTACAGTGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTACCTGGCCATCGTC 1715 Query 9772 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 9829 | ||||| ||| || ||| | ||||| || | ||| || || ||| | | | Sbjct 1716 CACGCTGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCGTCACCAGCATCT 1773 Query 9830 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAG 9889 |||||| ||||||| | | |||||||||||||||||||||||| ||||| Sbjct 1774 TCACCTGGGGCCTGGCAGTGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGTCCCAAG 1833 Query 9890 ATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGA 9949 | || ||| | | || |||| ||||||||| | ||||| |||| Sbjct 1834 AGGAGGCTGGACAGACTTTCTGCAGTCCTCTTTACCCAGAGGATAATGAAAATGCCTGGA 1893 Query 9950 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 10009 ||| ||| | | | ||| ||| | |||| | ||||||||||| |||||| Sbjct 1894 AGCGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTTGCTCTGCCTCTGCTCGTTATGG 1953 Query 10010 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 10069 | ||||||| | | |||||| | || |||| |||| ||||||| || || || |||| Sbjct 1954 CCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCCCCAGTAAAAAAAAATACA 2013 Query 10070 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 10129 | ||||| ||||||| |||||||| ||||||| || ||| |||| ||||||||||||| Sbjct 2014 AAGCCATTCGGCTCATTTTTGTCATTATGGTGGTCTTCTTTATTTTCTGGACACCCTACA 2073 Query 10130 ACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCATT 10187 | | ||| |||| || ||| | ||||| || | ||| || | ||| ||| Sbjct 2074 ATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGGAGGCCGACTGTGAGCA-- 2128 Query 10188 GAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTG 10247 |||||| | ||||| ||||| ||||| | ||| || | |||||||| ||||| || Sbjct 2129 GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGATCGCCTACACGCACTGCTG 2188 Query 10248 CATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTT 10307 | ||||||| |||||||| || ||||| || |||| ||| | | ||||| |||||| Sbjct 2189 CGTCAACCCCGTGATCTATGCCTTCGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACTT 2248 Query 10308 CTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364 ||||||| | ||||||||||||| |||| | ||| || || || || |||| Sbjct 2249 TTTCCACAGGCATATGGCCATCTACCTGGGCAAATTCATGCCATTTCTTCCTAGTGA 2305 Score = 306 bits (338), Expect = 4e-78 Identities = 610/897 (68%), Gaps = 14/897 (2%) Strand=Plus/Plus Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417 ||| | |||||| || ||||| |||| || |||||||| | | |||||| | Sbjct 1419 CCCCCACTGTATTCCCTGGTGTTCACGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 1478 Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477 || ||| || ||||| || | || | | | || ||||| | ||| | ||| |||| Sbjct 1479 ATCCTCACAAAATACAAGAGGCTCCATATTATGACCAACATCTACCTGCTCAACCTGGCC 1538 Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537 || ||||| |||| || || || || ||||||| ||||| |||||| || | || | Sbjct 1539 ATTTCTGATGTGCTCTTCCTGTTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGAA 1597 Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597 | || ||| |||||| | ||||||| | ||| || | | ||||||| Sbjct 1598 C--GAGTGGGTTTTTGGCCACCGCATGTGTAAGTTACTCTCCGGGCTCTATTACATGGGT 1655 Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657 ||||||| || |||| | ||||||||| | || ||||| |||| || || | ||| Sbjct 1656 TTGTACAGTGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTACCTGGCCATCGTC 1715 Query 176658 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 176715 | ||||| ||| || ||| | ||||| || | ||| || || ||| | | | Sbjct 1716 CACGCTGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCGTCACCAGCATCT 1773 Query 176716 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAG 176775 |||||| ||||||| | | |||||||||||||||||||||||| ||||| Sbjct 1774 TCACCTGGGGCCTGGCAGTGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGTCCCAAG 1833 Query 176776 ATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGA 176835 | || ||| | | || |||| ||||||||| | ||||| |||| Sbjct 1834 AGGAGGCTGGACAGACTTTCTGCAGTCCTCTTTACCCAGAGGATAATGAAAATGCCTGGA 1893 Query 176836 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 176895 ||| ||| | | | ||| ||| | |||| | ||||||||||| |||||| Sbjct 1894 AGCGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTTGCTCTGCCTCTGCTCGTTATGG 1953 Query 176896 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 176955 | ||||||| | | |||||| | || |||| |||| ||||||| || || || |||| Sbjct 1954 CCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCCCCAGTAAAAAAAAATACA 2013 Query 176956 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 177015 | ||||| ||||||| |||||||| ||||||| || ||| |||| ||||||||||||| Sbjct 2014 AAGCCATTCGGCTCATTTTTGTCATTATGGTGGTCTTCTTTATTTTCTGGACACCCTACA 2073 Query 177016 ACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCATT 177073 | | ||| |||| || ||| | ||||| || | ||| || | ||| ||| Sbjct 2074 ATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGGAGGCCGACTGTGAGCA-- 2128 Query 177074 GAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTG 177133 |||||| | ||||| ||||| ||||| | ||| || | |||||||| ||||| || Sbjct 2129 GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGATCGCCTACACGCACTGCTG 2188 Query 177134 CATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTT 177193 | ||||||| |||||||| || ||||| || |||| ||| | | ||||| |||||| Sbjct 2189 CGTCAACCCCGTGATCTATGCCTTCGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACTT 2248 Query 177194 CTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250 ||||||| | ||||||||||||| |||| | ||| || || || || |||| Sbjct 2249 TTTCCACAGGCATATGGCCATCTACCTGGGCAAATTCATGCCATTTCTTCCTAGTGA 2305 >seq43242 Length=2395 Score = 297 bits (328), Expect = 2e-75 Identities = 601/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417 ||| | |||||| || ||||| |||| || |||||||| | | |||||| | Sbjct 876 CCCCCACTGTATTCCCTGGTGTTCACGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 817 Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477 || ||| || ||||| || | || | | || ||||| | ||| | ||| |||| Sbjct 816 ATCCTCACAAAATACAAGAGGCTCCGTATTATGACCAACATCTACCTGCTCAACCTGGCC 757 Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537 || ||||| |||| || || || || ||||||| ||||| |||||| || | || | Sbjct 756 ATTTCTGATGTGCTCTTCCTGTTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGAA 698 Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597 | || ||| |||||| | | ||||||| | ||| || | | ||||||| Sbjct 697 C--GAGTGGGTTTTTGGCCACTGCATGTGTAAGTTACTCTCCGGGCTCTATTACATGGGT 640 Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657 |||||||| || |||| | ||||||||| | || ||||| |||| || || ||||| Sbjct 639 TTGTACAGCGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTACCTGGCCATTGTC 580 Query 176658 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 176715 | ||||| ||| || ||| | ||||| || | ||| || | ||| | | | Sbjct 579 CACGCTGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCATCACCAGCATCT 522 Query 176716 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAG 176775 |||||| ||||||| | | |||||||||||||||||||||||| ||||| Sbjct 521 TCACCTGGGGCCTGGCAGTGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGTCCCAAG 462 Query 176776 ATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGA 176835 | || ||| | | || |||| ||||||||| | ||||| |||| Sbjct 461 AGGAGGCTGGACAGACTTTCTGCAGTCCTCTTTACCCAGAGGATAATGAAAATGCCTGGA 402 Query 176836 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 176895 ||| ||| | | | ||| ||| | |||| | ||||||||||| |||||| Sbjct 401 AGCGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTTGCTCTGCCTCTGCTCGTTATGG 342 Query 176896 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 176955 | ||||||| | | |||||| | || |||| |||| ||||||| || || || |||| Sbjct 341 CCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCCCCAGTAAAAAAAAATACA 282 Query 176956 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 177015 | ||||| ||||||| |||||||| ||||| | || ||| |||| ||||||||||||| Sbjct 281 AAGCCATTCGGCTCATTTTTGTCATTATGGTTGTCTTCTTTATTTTCTGGACACCCTACA 222 Query 177016 ACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCATT 177073 | | ||| |||| || ||| | ||||| || | ||| || | ||| ||| Sbjct 221 ATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGGAGGCCGACTGTGAGCA-- 167 Query 177074 GAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTG 177133 |||||| | ||||| ||||| ||||| | ||| || | |||||||| ||||| || Sbjct 166 GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGATCGCCTACACGCACTGCTG 107 Query 177134 CATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTT 177193 | ||||||| |||||||| || || || || |||| ||| | | ||||| |||||| Sbjct 106 CGTCAACCCCGTGATCTATGCCTTTGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACTT 47 Query 177194 CTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTT 177238 ||||||| | ||||||||||||| |||| | ||| || || Sbjct 46 TTTCCACAGGCATATGGCCATCTACCTGGGCAAATTCATGCCATT 2 Score = 297 bits (328), Expect = 2e-75 Identities = 601/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531 ||| | |||||| || ||||| |||| || |||||||| | | |||||| | Sbjct 876 CCCCCACTGTATTCCCTGGTGTTCACGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 817 Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591 || ||| || ||||| || | || | | || ||||| | ||| | ||| |||| Sbjct 816 ATCCTCACAAAATACAAGAGGCTCCGTATTATGACCAACATCTACCTGCTCAACCTGGCC 757 Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651 || ||||| |||| || || || || ||||||| ||||| |||||| || | || | Sbjct 756 ATTTCTGATGTGCTCTTCCTGTTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGAA 698 Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711 | || ||| |||||| | | ||||||| | ||| || | | ||||||| Sbjct 697 C--GAGTGGGTTTTTGGCCACTGCATGTGTAAGTTACTCTCCGGGCTCTATTACATGGGT 640 Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771 |||||||| || |||| | ||||||||| | || ||||| |||| || || ||||| Sbjct 639 TTGTACAGCGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTACCTGGCCATTGTC 580 Query 9772 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 9829 | ||||| ||| || ||| | ||||| || | ||| || | ||| | | | Sbjct 579 CACGCTGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCATCACCAGCATCT 522 Query 9830 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAG 9889 |||||| ||||||| | | |||||||||||||||||||||||| ||||| Sbjct 521 TCACCTGGGGCCTGGCAGTGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGTCCCAAG 462 Query 9890 ATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGA 9949 | || ||| | | || |||| ||||||||| | ||||| |||| Sbjct 461 AGGAGGCTGGACAGACTTTCTGCAGTCCTCTTTACCCAGAGGATAATGAAAATGCCTGGA 402 Query 9950 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 10009 ||| ||| | | | ||| ||| | |||| | ||||||||||| |||||| Sbjct 401 AGCGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTTGCTCTGCCTCTGCTCGTTATGG 342 Query 10010 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 10069 | ||||||| | | |||||| | || |||| |||| ||||||| || || || |||| Sbjct 341 CCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCCCCAGTAAAAAAAAATACA 282 Query 10070 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 10129 | ||||| ||||||| |||||||| ||||| | || ||| |||| ||||||||||||| Sbjct 281 AAGCCATTCGGCTCATTTTTGTCATTATGGTTGTCTTCTTTATTTTCTGGACACCCTACA 222 Query 10130 ACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCATT 10187 | | ||| |||| || ||| | ||||| || | ||| || | ||| ||| Sbjct 221 ATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGGAGGCCGACTGTGAGCA-- 167 Query 10188 GAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTG 10247 |||||| | ||||| ||||| ||||| | ||| || | |||||||| ||||| || Sbjct 166 GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGATCGCCTACACGCACTGCTG 107 Query 10248 CATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTT 10307 | ||||||| |||||||| || || || || |||| ||| | | ||||| |||||| Sbjct 106 CGTCAACCCCGTGATCTATGCCTTTGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACTT 47 Query 10308 CTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTT 10352 ||||||| | ||||||||||||| |||| | ||| || || Sbjct 46 TTTCCACAGGCATATGGCCATCTACCTGGGCAAATTCATGCCATT 2 >seq2560 Length=892758 Score = 176 bits (194), Expect = 5e-39 Identities = 136/162 (84%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||| |||||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 722490 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 722431 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| || ||||||| ||||||||| ||||| || | || Sbjct 722430 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCACCATTCACC 722371 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||||||||| ||| ||||| || || ||||||||| Sbjct 722370 ACGTAGAACTGGCAGAGGGCATGGCATGGGGGGAGGGCCATG 722329 >seq28392 Length=124393 Score = 165 bits (182), Expect = 1e-35 Identities = 131/157 (83%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||| || ||||||||| || ||||| ||||||||||| ||||| | ||| Sbjct 5924 CAGCGCCGCAGCCGCAGCCTGAGGGTCTTCAGCTTCTCCCCCAGGGAATTCACGTGCTCC 5983 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | || ||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 5984 TTGAT---GTCAGGGCCGTGGTTCTCAGCCTGTGGCATCACCTCCTCCAGGTAAAACTGG 6040 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||| || |||| ||| ||||| ||||||||||||| Sbjct 6041 ATCATTTCCGACAAGGCTTGGCAACCCAGGTAACCCT 6077 Score = 104 bits (114), Expect = 3e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||||| |||||| | |||| ||||| ||||||||||| ||||||||||||||||| Sbjct 3656 TCAGTTTTCCATCTTCATTGTCACGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 3715 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| || | || ||||||| Sbjct 3716 ACTCATGGCTTTGTAGACACCCCTCTCTTGGAGCT 3750 >seq605834 Length=324 Score = 154 bits (170), Expect = 2e-32 Identities = 191/259 (74%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 ||||||||||| ||||||| ||||||| | | |||||| | || |||| |||| ||| Sbjct 254 TGCCTCTGCTCGTTATGGCCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCC 195 Query 176938 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 176997 |||| || || || ||||| ||||| ||||||| |||||||| ||||||| || ||| Sbjct 194 CCAGTAAAAAAAAATACAAAGCCATTCGGCTCATTTTTGTCATTATGGTGGTCTTCTTTA 135 Query 176998 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCT 177055 |||| |||||||||||||| | ||| |||| || ||| | ||||| || | ||| Sbjct 134 TTTTCTGGACACCCTACAATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGG 78 Query 177056 TAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 177115 || | ||| ||| |||||| | ||||| ||||| ||||| | ||| || | Sbjct 77 AGGCCGACTGTGAGCA--GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGAT 20 Query 177116 AGCCTACACACACTGTTGC 177134 |||||||| ||||| ||| Sbjct 19 CGCCTACACGCACTGCTGC 1 Score = 154 bits (170), Expect = 2e-32 Identities = 191/259 (74%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 ||||||||||| ||||||| ||||||| | | |||||| | || |||| |||| ||| Sbjct 254 TGCCTCTGCTCGTTATGGCCATCTGCTATTCAGGAATTATTAAAACACTGCTGAGATGCC 195 Query 10052 CCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTG 10111 |||| || || || ||||| ||||| ||||||| |||||||| ||||||| || ||| Sbjct 194 CCAGTAAAAAAAAATACAAAGCCATTCGGCTCATTTTTGTCATTATGGTGGTCTTCTTTA 135 Query 10112 TTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCT 10169 |||| |||||||||||||| | ||| |||| || ||| | ||||| || | ||| Sbjct 134 TTTTCTGGACACCCTACAATCTGGTTGTCCTCCTCTCTGCTTTTCA---AATGCACTTGG 78 Query 10170 TAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGT 10229 || | ||| ||| |||||| | ||||| ||||| ||||| | ||| || | Sbjct 77 AGGCCGACTGTGAGCA--GAGCAGACAGCTGGACCTGGCTATGCTGGTGACAGAAGTGAT 20 Query 10230 AGCCTACACACACTGTTGC 10248 |||||||| ||||| ||| Sbjct 19 CGCCTACACGCACTGCTGC 1 >seq12021 Length=99980 Score = 125 bits (138), Expect = 8e-24 Identities = 246/363 (68%), Gaps = 3/363 (1%) Strand=Plus/Minus Query 176346 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 176405 || ||| || | ||| || |||| | | |||||| || |||| || | ||||| ||| Sbjct 6795 GCCCAGCTGCTGCCCCCCTTGTACTCGGTGGTGTTTGTCATTGGCCTGATCGGCAACATC 6736 Query 176406 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 176465 ||||||| | | |||| ||||| || | |||||| | | || | ||| | || Sbjct 6735 CTAGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGCATGACCAGCATCTACCTC 6676 Query 176466 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 176525 | ||| |||| || |||||| | | || || || || ||||||| ||||| |||| Sbjct 6675 CTCAACCTGGCCATTTCTGACCTCGTCTTCCTCTTCACACTGCCATTCTGGATTGACTAC 6616 Query 176526 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 176585 | | || | |||| ||| ||| ||| | || ||||||| |||||| || | Sbjct 6615 AAGG---TGAAGGATGACTGGGTTTTCGGTGATGCCATGTGTAAGCTGCTCTCTGGGTTC 6559 Query 176586 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 176645 | || |||| |||||||| || |||| | |||||||||||| || | |||||||| Sbjct 6558 TATTTCATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTGCTGACCATTGACAGGTAC 6499 Query 176646 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 176705 || || | ||| | ||||| |||| || || | | || || |||| ||| || || Sbjct 6498 CTGGCCATCGTCCACGCTGTGTTTGCTCTGCGGGCTCGCACTGTCACCTTTGGTATCGTC 6439 Query 176706 ACC 176708 ||| Sbjct 6438 ACC 6436 Score = 125 bits (138), Expect = 8e-24 Identities = 246/363 (68%), Gaps = 3/363 (1%) Strand=Plus/Minus Query 9460 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 9519 || ||| || | ||| || |||| | | |||||| || |||| || | ||||| ||| Sbjct 6795 GCCCAGCTGCTGCCCCCCTTGTACTCGGTGGTGTTTGTCATTGGCCTGATCGGCAACATC 6736 Query 9520 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 9579 ||||||| | | |||| ||||| || | |||||| | | || | ||| | || Sbjct 6735 CTAGTGGTCCTGGTCCTCATGCAATACAAGAGGCTCAAAAGCATGACCAGCATCTACCTC 6676 Query 9580 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 9639 | ||| |||| || |||||| | | || || || || ||||||| ||||| |||| Sbjct 6675 CTCAACCTGGCCATTTCTGACCTCGTCTTCCTCTTCACACTGCCATTCTGGATTGACTAC 6616 Query 9640 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 9699 | | || | |||| ||| ||| ||| | || ||||||| |||||| || | Sbjct 6615 AAGG---TGAAGGATGACTGGGTTTTCGGTGATGCCATGTGTAAGCTGCTCTCTGGGTTC 6559 Query 9700 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 9759 | || |||| |||||||| || |||| | |||||||||||| || | |||||||| Sbjct 6558 TATTTCATGGGCTTGTACAGCGAGATCTTCTTCATCATCCTGCTGACCATTGACAGGTAC 6499 Query 9760 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 9819 || || | ||| | ||||| |||| || || | | || || |||| ||| || || Sbjct 6498 CTGGCCATCGTCCACGCTGTGTTTGCTCTGCGGGCTCGCACTGTCACCTTTGGTATCGTC 6439 Query 9820 ACC 9822 ||| Sbjct 6438 ACC 6436 >seq2154 Length=194813 Score = 102 bits (112), Expect = 1e-16 Identities = 239/356 (67%), Gaps = 11/356 (3%) Strand=Plus/Minus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | ||| ||||||||||| | ||| || | || ||| | || | | Sbjct 178158 TGCCACTGCTTGTCATGATTGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 178099 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || ||||||||| ||||||| | |||||||||||||| |||||| | | ||| | Sbjct 178098 GCAATGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTTGTGATCATGATTGTCTACT 178039 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054 || | || ||| | ||||||||||| || || || ||| ||||| || | | ||| Sbjct 178038 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGTA----TTC 177983 Query 177055 -TTAACCT--GCAG-TGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAA 177110 || ||| | || ||| |||||| | ||||| || ||| | | || | Sbjct 177982 TTTGGCCTGAGTAGCTGTAAGAGCAGCAGTCAGCTGGACCAAGCCATGCAGGTGACCGAG 177923 Query 177111 ACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAG 177170 || | | || ||||| ||||||||||| | |||||||| || || ||||||||| Sbjct 177922 ACCCTGGGGCTGACCCACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGGGAGAAG 177863 Query 177171 TTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 || || || | || | | ||||||| | | | |||| |||||||||| Sbjct 177862 TTCAGGAGGTATCTCTCCGTGTTCTTCCGAAAGCATATTGCCAAACACCTCTGCAA 177807 Score = 102 bits (112), Expect = 1e-16 Identities = 239/356 (67%), Gaps = 11/356 (3%) Strand=Plus/Minus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | ||| ||||||||||| | ||| || | || ||| | || | | Sbjct 178158 TGCCACTGCTTGTCATGATTGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 178099 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || ||||||||| ||||||| | |||||||||||||| |||||| | | ||| | Sbjct 178098 GCAATGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTTGTGATCATGATTGTCTACT 178039 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168 || | || ||| | ||||||||||| || || || ||| ||||| || | | ||| Sbjct 178038 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGTA----TTC 177983 Query 10169 -TTAACCT--GCAG-TGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAA 10224 || ||| | || ||| |||||| | ||||| || ||| | | || | Sbjct 177982 TTTGGCCTGAGTAGCTGTAAGAGCAGCAGTCAGCTGGACCAAGCCATGCAGGTGACCGAG 177923 Query 10225 ACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAG 10284 || | | || ||||| ||||||||||| | |||||||| || || ||||||||| Sbjct 177922 ACCCTGGGGCTGACCCACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGGGAGAAG 177863 Query 10285 TTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 || || || | || | | ||||||| | | | |||| |||||||||| Sbjct 177862 TTCAGGAGGTATCTCTCCGTGTTCTTCCGAAAGCATATTGCCAAACACCTCTGCAA 177807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583901801183160