Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2560 131 1e-25 >seq2560 Length=892758 Score = 131 bits (144), Expect = 1e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||| |||||| ||| ||||||| || || || |||||||||||||| ||||| || | Sbjct 722492 TCAGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGG 722433 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | |||| ||||||| ||||||||||||||| || Sbjct 722432 GCACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCACCATTCA 722373 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 ||||||| ||||| || | | || || || ||||| ||||| | | ||| || | || Sbjct 722372 CCACGTAGAACTGGCAGAGGGCATGGCATGGGGGGAGGGCCATGAGAGGGAGATCTGAGG 722313 Query 21169 GG 21170 || Sbjct 722312 GG 722311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423411350539920